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scnpilot_cont_500_p_scaffold_2033_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2033_curated_1
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(276..1529)
DNA (1254bp) protein (418aa)
LacY n=81 Tax=Enterobacteriaceae RepID=A7KGA6_KLEPN
galactoside permease
Lactose permease {ECO:0000313|EMBL:EOQ51104.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
scnpilot_cont_500_p_scaffold_2033_curated_2
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1581..4655)
DNA (3075bp) protein (1025aa)
Beta-galactosidase {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613}; Short=Beta-gal {ECO:0000256|HAMAP-Rule:MF_01687};; EC=3.2.1.23 {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|HAMAP-Rule:MF_01687}; TaxID=1208592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 680.;"
lacZ; beta-D-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=12 Tax=Enterobacteriaceae RepID=K8DM45_CROSK
scnpilot_cont_500_p_scaffold_2033_curated_3
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4777..5925)
DNA (1149bp) protein (383aa)
Lactose operon repressor n=12 Tax=Enterobacteriaceae RepID=K1P5Q8_KLEPN
Lactose operon repressor {ECO:0000313|EMBL:ESM40442.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
lacI; lac repressor
scnpilot_cont_500_p_scaffold_2033_curated_4
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6206..6484
DNA (279bp) protein (93aa)
Uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=K8DJD3_CROSK
Uncharacterized protein {ECO:0000313|EMBL:CCK12847.1}; TaxID=1208592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 680.;"
signaling membrane protein
scnpilot_cont_500_p_scaffold_2033_curated_5
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6815..7108)
DNA (294bp) protein (98aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=K8D686_CROSK
Isocitrate lyase {ECO:0000313|EMBL:KJN12855.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
ISEc8 transposase
scnpilot_cont_500_p_scaffold_2033_curated_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7207..7974)
DNA (768bp) protein (256aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
FecE n=77 Tax=Enterobacteriaceae RepID=G9G2C4_KLEPN
ABC transporter family protein {ECO:0000313|EMBL:KDX30998.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
scnpilot_cont_500_p_scaffold_2033_curated_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7975..8931)
DNA (957bp) protein (319aa)
ABC-type Fe3+-siderophore transport system, permease component n=30 Tax=Enterobacteriaceae RepID=D6DN72_ENTCL
ABC-type Fe3+-siderophore transport system, permease component
FecD_2 protein {ECO:0000313|EMBL:CEN65602.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
scnpilot_cont_500_p_scaffold_2033_curated_8
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8928..9926)
DNA (999bp) protein (333aa)
ABC-type Fe3+-siderophore transport system, permease component n=69 Tax=Enterobacteriaceae RepID=D6DN73_ENTCL
ABC-type Fe3+-siderophore transport system, permease component
Iron-dicitrate transporter permease subunit {ECO:0000313|EMBL:AIA45176.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
scnpilot_cont_500_p_scaffold_2033_curated_9
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9923..10825)
DNA (903bp) protein (301aa)
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) n=12 Tax=Enterobacteriaceae RepID=K8D6Z0_CROSK
Iron(III) dicitrate-binding periplasmic protein {ECO:0000313|EMBL:AKE93388.1}; TaxID=28141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii (Enterobacter sakazakii).;"
periplasmic binding protein
scnpilot_cont_500_p_scaffold_2033_curated_10
Enterobacter sp. 35669, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10870..13194)
DNA (2325bp) protein (775aa)
Fe(3+) dicitrate transporter fecA n=5 Tax=Enterobacter cloacae complex RepID=U7CC18_9ENTR
Transporter {ECO:0000313|EMBL:KJN26597.1}; TaxID=1619244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35669.;"
TonB-dependent siderophore receptor
scnpilot_cont_500_p_scaffold_2033_curated_11
Enterobacter sp. 35027, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13281..14234)
DNA (954bp) protein (318aa)
Uncharacterized protein n=3 Tax=Enterobacter cloacae complex RepID=V3HH19_ENTCL
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:KJN96965.1}; TaxID=1619239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35027.;"
fec operon regulator FecR
scnpilot_cont_500_p_scaffold_2033_curated_12
Enterobacter sp. 35669, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14231..14752)
DNA (522bp) protein (174aa)
RNA polymerase sigma factor n=11 Tax=Enterobacteriaceae RepID=R8VFQ6_9ENTR
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1619244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35669.;"
Sigma-70 region 2
Displaying 12 items

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