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scnpilot_expt_750_bf_scaffold_204_curated

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_204_curated_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205..828)
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5K4_THECD
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF06794.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_204_curated_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1443..3047)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV62_SORCE
hypothetical protein
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_204_curated_3
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3441..4727)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii AMC34 RepID=K1ITC3_9GAMM
Lipase {ECO:0000313|EMBL:KIF82292.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
putative lipase transmembrane protein
scnpilot_expt_750_bf_scaffold_204_curated_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4888..7935
DNA (3048bp) protein (1016aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FUC0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98617.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_expt_750_bf_scaffold_204_curated_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8152..10383
DNA (2232bp) protein (744aa)
Putative lipoprotein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEW7_ANADF
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABS27263.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
scnpilot_expt_750_bf_scaffold_204_curated_6
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10562..10858
DNA (297bp) protein (99aa)
Esterase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWS6_CORCM
esterase
Esterase {ECO:0000313|EMBL:AFE04109.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
scnpilot_expt_750_bf_scaffold_204_curated_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10951..12273
DNA (1323bp) protein (441aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9]
Peptidase M24 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHE1_HALO1
Peptidase M24 {ECO:0000313|EMBL:ACY18286.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
scnpilot_expt_750_bf_scaffold_204_curated_8
unknown

Not on your lists

12372..12680
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_204_curated_9
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12724..13113)
DNA (390bp) protein (130aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
methionine sulfoxide reductase B; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YDI9_9RHOO
scnpilot_expt_750_bf_scaffold_204_curated_10
unknown

Not on your lists

comp(13198..14229)
DNA (1032bp) protein (344aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_204_curated_11
unknown

Not on your lists

comp(14226..15650)
DNA (1425bp) protein (475aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_204_curated_12
unknown

Not on your lists

comp(15647..16744)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-I18 RepID=UPI00036A5C79
scnpilot_expt_750_bf_scaffold_204_curated_13
unknown

Not on your lists

comp(16741..17430)
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_204_curated_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17741..19252
DNA (1512bp) protein (504aa)
His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJA1_MYXFH
Amino acid ABC transporter binding protein and permease protein {ECO:0000313|EMBL:KFE72503.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein; K02029 polar amino acid transport system permease protein; K02030 polar amino acid transport system substrate-binding protein
scnpilot_expt_750_bf_scaffold_204_curated_15
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19249..19950
DNA (702bp) protein (234aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC-type polar amino acid transport system ATPase component n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WET9_9BURK
ABC transporter family protein {ECO:0000313|EMBL:AIO45884.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
scnpilot_expt_750_bf_scaffold_204_curated_16
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20151..20813
DNA (663bp) protein (221aa)
peroxidase (EC:1.11.1.7)
Peroxidase {ECO:0000313|EMBL:ABE46717.1}; EC=1.11.1.7 {ECO:0000313|EMBL:ABE46717.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Peroxidase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121S5_POLSJ
scnpilot_expt_750_bf_scaffold_204_curated_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21044..25096
DNA (4053bp) protein (1351aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y9A6_SORCE
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF06826.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_204_curated_18
unknown

Not on your lists

comp(25183..26202)
DNA (1020bp) protein (340aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_204_curated_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26381..29149)
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0V0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39122.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_204_curated_20
unknown

Not on your lists

comp(29267..29944)
DNA (678bp) protein (226aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_204_curated_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30046..30465
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05749.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_204_curated_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30462..30875
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05750.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
scnpilot_expt_750_bf_scaffold_204_curated_23
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30872..31852
DNA (981bp) protein (327aa)
diguanylate cyclase n=1 Tax=Desulfovibrio longus RepID=UPI0003B759A6
response regulator
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:BAE52255.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_expt_750_bf_scaffold_204_curated_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31921..33066)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2V1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39124.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_204_curated_25
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33437..34921)
DNA (1485bp) protein (495aa)
Phospholipase D family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLB1_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE60818.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
cls4; phospholipase D
scnpilot_expt_750_bf_scaffold_204_curated_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35272..36006
DNA (735bp) protein (245aa)
Succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3S9_SORCE
succinyl-CoA:3-ketoacid-CoA transferase
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:AGP39126.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_expt_750_bf_scaffold_204_curated_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36003..36683
DNA (681bp) protein (227aa)
Succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJH2_SORCE
succinyl-CoA:3-ketoacid-CoA transferase
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B {ECO:0000313|EMBL:EYF00796.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
scnpilot_expt_750_bf_scaffold_204_curated_28
Rhodococcus sp. DK17, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36820..38235)
DNA (1416bp) protein (472aa)
Erythromycin esterase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WTT7_9NOCA
Putative erythromycin esterase {ECO:0000313|EMBL:ABP48126.1}; TaxID=186196 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. DK17.;"
erythromycin esterase-like enzyme
scnpilot_expt_750_bf_scaffold_204_curated_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38400..39593
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1A0_SORCE
CglB {ECO:0000313|EMBL:EYF00831.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_204_curated_30
unknown

Not on your lists

39655..39915
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 1-30 of 119 in total

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