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SCNpilot_cont_1000_bf_scaffold_262_curated

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_262_curated_1
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..494)
DNA (492bp) protein (164aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase subunit alpha n=2 Tax=Pandoraea RepID=V5UHY4_9BURK
NADP transhydrogenase subunit alpha {ECO:0000313|EMBL:AJE98915.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_2
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

949..1425
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B4CEC
Uncharacterized protein {ECO:0000313|EMBL:EON13694.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
NUDIX hydrolase
SCNpilot_cont_1000_bf_scaffold_262_curated_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1422..2576
DNA (1155bp) protein (385aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
thiouridylase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344A204
SCNpilot_cont_1000_bf_scaffold_262_curated_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2646..4247
DNA (1602bp) protein (534aa)
glutamate synthase (EC:1.4.1.13)
glutamate synthase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DB5BA
Glutamate synthase {ECO:0000313|EMBL:KHQ94380.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4472..5272
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349C21F
Uncharacterized protein {ECO:0000313|EMBL:EON13697.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_262_curated_6
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5269..5487
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D3ABB
Protein EsaG {ECO:0000313|EMBL:EON13698.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5484..5876
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003815623
Uncharacterized protein {ECO:0000313|EMBL:KHQ94382.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5873..6229
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349663F
Uncharacterized protein {ECO:0000313|EMBL:EON13700.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_9
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6226..7068
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036887FE
Protein EsaJ {ECO:0000313|EMBL:EON13701.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
type III secretion apparatus lipoprotein, YscJ/HrcJ family
SCNpilot_cont_1000_bf_scaffold_262_curated_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7008..7712
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D467C
Uncharacterized protein {ECO:0000313|EMBL:EON13702.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_262_curated_11
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7688..8377
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003483B1C
Uncharacterized protein {ECO:0000313|EMBL:KHQ94005.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_262_curated_12
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8370..9506
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035EDB53
Uncharacterized protein {ECO:0000313|EMBL:KHQ94384.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
type III secretion regulator YopN/LcrE/InvE/MxiC
SCNpilot_cont_1000_bf_scaffold_262_curated_13
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9583..9996)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003719EAF
Uncharacterized protein {ECO:0000313|EMBL:AHB78567.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_14
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10198..10437)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003460913
Uncharacterized protein {ECO:0000313|EMBL:AJE98925.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_15
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10412..11743)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF77E
Type-III secretion protein {ECO:0000313|EMBL:EON13707.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
type-III secretion protein; K03220 type III secretion protein SctD
SCNpilot_cont_1000_bf_scaffold_262_curated_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11740..13356)
DNA (1617bp) protein (539aa)
Outer membrane secretin SsaC n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X2I9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHQ94388.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
type III secretion outer membrane pore, YscC/HrcC family
SCNpilot_cont_1000_bf_scaffold_262_curated_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13359..13955)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036AC7E3
Uncharacterized protein {ECO:0000313|EMBL:KHQ93999.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_18
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14201..14860
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348D4AF
Two component system sensor kinase SsrB {ECO:0000313|EMBL:EON13710.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein; K14979 two-component system, LuxR family, secretion system response regulator SsrB
SCNpilot_cont_1000_bf_scaffold_262_curated_19
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15017..15406
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034530A8
Uncharacterized protein {ECO:0000313|EMBL:AKC69609.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_20
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15403..17478
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034548C7
Secretion system apparatus protein SsaV {ECO:0000313|EMBL:AKC69610.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
escV; secretion system apparatus protein SsaV; K03230 type III secretion protein SctV rbh
SCNpilot_cont_1000_bf_scaffold_262_curated_21
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17480..18844
DNA (1365bp) protein (455aa)
type III secretion system ATPase (EC:3.6.1.14); K03224 ATP synthase in type III secretion protein SctN [EC:3.6.3.14] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346D408
Type III secretion system ATPase {ECO:0000313|EMBL:EON13713.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_22
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18820..19230
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X2M1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AJP56494.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_23
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19349..19795
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C97C7
Uncharacterized protein {ECO:0000313|EMBL:EON13715.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_24
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19785..20954
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BDBC7
Translocation protein in type III secretion {ECO:0000313|EMBL:EON13716.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_25
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21002..21652
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A6239
Type III secretion system protein SsaR {ECO:0000313|EMBL:AJE98935.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
epaP; type III secretion apparatus protein, YscR/HrcR family
SCNpilot_cont_1000_bf_scaffold_262_curated_26
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21672..21938
DNA (267bp) protein (89aa)
type III secretion system protein SsaS n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346404F
Type III secretion system protein SsaS {ECO:0000313|EMBL:KHQ94398.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
escS; type III secretion apparatus protein EscS; K03227 type III secretion protein SctS
SCNpilot_cont_1000_bf_scaffold_262_curated_27
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21944..22786
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035F5ABC
Type III secretion system EscT protein {ECO:0000313|EMBL:EON13719.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
escT; type III secretion system EscT protein; K03228 type III secretion protein SctT
SCNpilot_cont_1000_bf_scaffold_262_curated_28
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22794..23945
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF4C2
Secretion system apparatus protein SsaU {ECO:0000313|EMBL:AKC69617.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
escU; secretion system apparatus protein SsaU; K03229 type III secretion protein SctU rbh
SCNpilot_cont_1000_bf_scaffold_262_curated_29
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23942..25018
DNA (1077bp) protein (359aa)
slt; peptidoglycan N-acetylmuramoylhydrolase (EC:3.2.1.17); K01185 lysozyme [EC:3.2.1.17]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003695209
Peptidoglycan N-acetylmuramoylhydrolase {ECO:0000313|EMBL:EON13721.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_262_curated_30
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25028..25639)
DNA (612bp) protein (204aa)
putative glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CDAC3
Glutathione S-transferase {ECO:0000313|EMBL:AJC16176.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
Displaying items 1-30 of 78 in total

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