name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_47_curated_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39..578)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034754D1
Uncharacterized protein {ECO:0000313|EMBL:KHQ93674.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_2
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(813..1349)
|
nicotinate phosphoribosyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D2EC0
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:KHQ97426.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
phosphoribosyltransferase; K07101
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1377..2717)
|
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
adenylosuccinate synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346EAC0
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_4
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2792..3952)
|
hisZ; hetero-octameric ATP phosphoribosyl transferase, tRNA synthetase-like subunit (EC:2.4.2.17); K02502 ATP phosphoribosyltransferase regulatory subunit
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344A06E
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_5
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3991..4146)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003601B27
Membrane protein {ECO:0000313|EMBL:KHQ93670.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein; K09937 hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_6
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4254..5156)
|
Protease activity modulator HflC; K04087 membrane protease subunit HflC [EC:3.4.-.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003467DB9
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_7
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5169..6503)
|
Protease activity modulator HflK; K04088 membrane protease subunit HflK [EC:3.4.-.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344D568
Membrane protein {ECO:0000313|EMBL:AHB77533.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_8
unknown
|
Not on your lists |
6587..6820
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_47_curated_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6743..7948)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346103E
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
small GTP-binding protein; K03665 GTP-binding protein HflX
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_10
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8012..8248)
|
RNA-binding protein Hfq n=3 Tax=Pandoraea RepID=V5UKR4_9BURK
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
RNA chaperone Hfq; K03666 host factor-I protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_11
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8375..9712)
|
GTP-binding protein Der n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B4C98
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
ribosome-associated GTPase EngA; K03977 GTP-binding protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_12
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9790..11007)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346268E
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
outer membrane assembly lipoprotein YfgL
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_13
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11064..11693)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003480FE0
Uncharacterized protein {ECO:0000313|EMBL:EON12050.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_14
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11726..13102)
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
histidyl-tRNA synthase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346DF9B
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_15
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13124..14404)
|
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348B763
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14423..15520)
|
XRE family transcriptional regulator n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PSW5_9BURK
XRE family transcriptional regulator {ECO:0000313|EMBL:AHB06414.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_17
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15713..16834)
|
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=6
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
50S rRNA methyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348FBAD
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_18
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16894..17319)
|
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
nucleoside diphosphate kinase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C23EC
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_19
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17728..18429
|
membrane protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A0CE0
Membrane protein {ECO:0000313|EMBL:KHQ93659.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein; K06890
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_20
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18661..20199)
|
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
rumA; 23S rRNA 5-methyluridine methyltransferase (EC:2.1.1.35); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036D03DB
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_21
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20310..21086)
|
3''''-5'''' exonuclease n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344FF62
Uncharacterized protein {ECO:0000313|EMBL:EON12058.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein; K07501 hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_22
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21201..22286)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034615D8
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
rpoS; RNA polymerase, sigma 38 subunit, RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_23
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22302..23129)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1DE4
Peptidase M23 {ECO:0000313|EMBL:EON12060.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
peptidase M23B; K06194 lipoprotein NlpD
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_24
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23162..24310)
|
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXT2_9BURK
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_25
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24307..25068)
|
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
surE; 5'-nucleotidase; K03787 5'-nucleotidase [EC:3.1.3.5]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344BA48
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_26
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25233..26051)
|
ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034798A8
ABC transporter permease {ECO:0000313|EMBL:AJE99518.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_27
unknown
|
Not on your lists |
comp(26073..26207)
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_47_curated_28
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26214..27029)
|
mannosyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D5C0E
Mannosyltransferase {ECO:0000313|EMBL:AJC19048.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
ABC transporter related protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_29
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27026..28057)
|
ABC transporter substrate-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B1905
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKC70370.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
signal peptide protein; K02051 NitT/TauT family transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_curated_30
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28162..29487)
|
CAIB/BAIF family protein; K07749 formyl-CoA transferase [EC:2.8.3.16]
CoA transferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DCE6D
CAIB/BAIF family protein {ECO:0000313|EMBL:EON12066.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
|