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SCNpilot_cont_1000_bf_scaffold_17_curated

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Displaying items 1-30 of 322 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_17_curated_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34..1584)
DNA (1551bp) protein (517aa)
sodium:solute symporter n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344DE8F
SSS family solute:Na+ symporter; K03307 solute:Na+ symporter, SSS family
Putative membrane protein {ECO:0000313|EMBL:AIO31147.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_2
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1581..1811)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B87D1
Uncharacterized protein {ECO:0000313|EMBL:EKS68289.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_17_curated_3
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2020..2430)
DNA (411bp) protein (137aa)
endoribonuclease L-PSP n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A2E9E
Endoribonuclease L-PSP {ECO:0000313|EMBL:EON13689.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
endoribonuclease L-PSP
SCNpilot_cont_1000_bf_scaffold_17_curated_4
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2430..2900)
DNA (471bp) protein (157aa)
h16_A2456; thioesterase (EC:3.1.2.-); K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000360E302
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AJF00595.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_5
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2988..4631)
DNA (1644bp) protein (548aa)
2-aminobenzoate-CoA ligase (EC:6.2.1.32); K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003467616
2-aminobenzoate-CoA ligase {ECO:0000313|EMBL:AHB74385.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_6
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4691..5875)
DNA (1185bp) protein (395aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
acyl-CoA dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003469B8B
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EON13686.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_7
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5889..6752)
DNA (864bp) protein (288aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EON13685.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EON13685.1};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
enoyl-CoA hydratase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345D1C2
enoyl-CoA hydratase
SCNpilot_cont_1000_bf_scaffold_17_curated_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6788..7600)
DNA (813bp) protein (271aa)
short-chain dehydrogenases/reductases (sdr) family protein (EC:1.-.-.-)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B4AD0
Short-chain dehydrogenases/reductases (Sdr) family protein {ECO:0000313|EMBL:EON13684.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7610..9952)
DNA (2343bp) protein (781aa)
abmA; salicylyl-CoA 5-hydroxylase (EC:1.14.13.40); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
salicylyl-CoA 5-hydroxylase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DFABA
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:KHQ98937.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_10
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10521..11876)
DNA (1356bp) protein (452aa)
membrane protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036F4E44
Membrane protein {ECO:0000313|EMBL:KHQ92447.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
major facilitator transporter; K03762 MFS transporter, MHS family, proline/betaine transporter
SCNpilot_cont_1000_bf_scaffold_17_curated_11
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11873..13270)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003485E63
Uncharacterized protein {ECO:0000313|EMBL:AJE97042.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_17_curated_12
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13488..14405
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346FA9C
LysR family transcriptional regulator {ECO:0000313|EMBL:EON13674.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_17_curated_13
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14489..16390)
DNA (1902bp) protein (634aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:KHQ92450.1}; EC=6.2.1.17 {ECO:0000313|EMBL:KHQ92450.1};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
prpE; propionyl-CoA synthetase; K01908 propionyl-CoA synthetase [EC:6.2.1.17]
acetyl-CoA synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347A818
SCNpilot_cont_1000_bf_scaffold_17_curated_14
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17145..17327
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BC113
Uncharacterized protein {ECO:0000313|EMBL:AIO66523.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_17_curated_15
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17428..18618
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034764A2
Uncharacterized protein {ECO:0000313|EMBL:AIO65015.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_17_curated_16
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18618..19820
DNA (1203bp) protein (401aa)
MFS transporter n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D4CE2
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KGR99269.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
RSp0499; transport transmembrane protein rbh
SCNpilot_cont_1000_bf_scaffold_17_curated_17
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19820..20698
DNA (879bp) protein (293aa)
methionine biosynthesis protein MetW-like protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C75BA
Methyltransferase small domain protein {ECO:0000313|EMBL:KGR99295.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_17_curated_18
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20705..21400
DNA (696bp) protein (232aa)
Conserved hypothethical protein n=1 Tax=Ralstonia syzygii R24 RepID=G3AA00_9RALS
Conserved hypothethical protein {ECO:0000313|EMBL:CCA88134.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
conserved hypothethical protein (fragment)
SCNpilot_cont_1000_bf_scaffold_17_curated_19
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21387..22664
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000373CE4F
Conserved hypothethical protein {ECO:0000313|EMBL:CCA88133.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
conserved hypothethical protein
SCNpilot_cont_1000_bf_scaffold_17_curated_20
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22740..24416)
DNA (1677bp) protein (559aa)
putative exported transglycosylase protein; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A4B6C
Lytic transglycosylase {ECO:0000313|EMBL:AJE97045.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_21
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24742..25074)
DNA (333bp) protein (111aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
Hydroxyacylglutathione hydrolase; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00038297B0
SCNpilot_cont_1000_bf_scaffold_17_curated_22
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25412..26272
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034516FA
SAM-dependent methyltransferase {ECO:0000313|EMBL:KHQ99200.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
type 11 methyltransferase
SCNpilot_cont_1000_bf_scaffold_17_curated_23
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26284..26733
DNA (450bp) protein (150aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
rnhA; ribonuclease HI protein (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
RNaseH ribonuclease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B9461
SCNpilot_cont_1000_bf_scaffold_17_curated_24
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26846..27586
DNA (741bp) protein (247aa)
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BFB83
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AJE97048.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_17_curated_trna_1
unknown

Not on your lists

27844..27915
DNA (72bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_17_curated_25
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28521..30761
DNA (2241bp) protein (747aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:EON13655.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EON13655.1};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
isocitrate dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003495921
SCNpilot_cont_1000_bf_scaffold_17_curated_26
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30883..31533)
DNA (651bp) protein (217aa)
TetR family transcriptional regulator n=2 Tax=Pandoraea RepID=V5UAP8_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:AHB74404.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_17_curated_27
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31691..32530
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349C523
Metal-dependent hydrolase {ECO:0000313|EMBL:AJE97054.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein; K07044
SCNpilot_cont_1000_bf_scaffold_17_curated_28
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33648..34688
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348E744
Porin {ECO:0000313|EMBL:AJE97055.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
porin
SCNpilot_cont_1000_bf_scaffold_17_curated_29
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34780..36072
DNA (1293bp) protein (431aa)
adenine permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CC519
Permease {ECO:0000313|EMBL:EON13650.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease rbh
Displaying items 1-30 of 322 in total

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