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SCNpilot_expt_1000_bf_scaffold_2642_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2642_curated_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96..2093)
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003636596
Bacteriophage Mu transposase {ECO:0000313|EMBL:CDN54728.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
transposase
SCNpilot_expt_1000_bf_scaffold_2642_curated_2
unknown

Not on your lists

comp(2090..2284)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2642_curated_3
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2281..2742)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JYV9_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM37205.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_2642_curated_4
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2739..3566)
DNA (828bp) protein (276aa)
ParB domain protein nuclease n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F6X3_9RHIZ
ParB domain protein nuclease {ECO:0000313|EMBL:EHS51528.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
transcriptional regulator protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_2642_curated_5
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3567..3941)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI000370DBDA
Uncharacterized protein {ECO:0000313|EMBL:EHS51529.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2642_curated_6
unknown

Not on your lists

comp(3938..4087)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2642_curated_7
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4212..4529)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JYF7_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM37187.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_2642_curated_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4720..5187
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI0003703102
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADZ72763.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_2642_curated_9
Burkholderia phage Bcep176, Caudovirales, Viruses

Not on your lists

5350..5580
DNA (231bp) protein (77aa)
Bacteriophage protein n=2 Tax=root RepID=B3D8F6_BURM1
bacteriophage protein
Gp54 {ECO:0000313|EMBL:ABA60055.1}; TaxID=348137 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Burkholderia phage Bcep176.;"
SCNpilot_expt_1000_bf_scaffold_2642_curated_10
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6073..6483)
DNA (411bp) protein (137aa)
HxlR-family transcriptional regulator n=3 Tax=Burkholderia cenocepacia RepID=B4EMR5_BURCJ
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ERI28244.1}; TaxID=985077 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia BC7.;"
HxlR-family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2642_curated_11
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6795..7268
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI00035D9764
Membrane protein {ECO:0000313|EMBL:KEA57060.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
putative cyclase
SCNpilot_expt_1000_bf_scaffold_2642_curated_12
unknown

Not on your lists

comp(7280..7984)
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2642_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8042..8773
DNA (732bp) protein (244aa)
septation inhibitor protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037AD487
minC; septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_2642_curated_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8806..9621
DNA (816bp) protein (272aa)
Site-determining protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JJD6_AGRRK
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
minD; cell division inhibitor MinD protein; K03609 septum site-determining protein MinD
SCNpilot_expt_1000_bf_scaffold_2642_curated_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9618..9866
DNA (249bp) protein (83aa)
Cell division topological specificity factor n=1 Tax=Rhizobium sp. CF080 RepID=J2J8I2_9RHIZ
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
minE; cell division topological specificity factor MinE
SCNpilot_expt_1000_bf_scaffold_2642_curated_16
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10217..10990
DNA (774bp) protein (258aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF122 RepID=J2IVI9_9RHIZ
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL52753.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
kinase
SCNpilot_expt_1000_bf_scaffold_2642_curated_17
unknown

Not on your lists

11381..11572
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2642_curated_18
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11585..11836)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003668D6A
Uncharacterized protein {ECO:0000313|EMBL:EJT01012.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2642_curated_19
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12054..12809)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036B4170
Regulatory protein GntR HTH {ECO:0000313|EMBL:CCV15990.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
GntR family transcriptional regulator
Displaying 19 items

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