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SCNpilot_expt_1000_bf_scaffold_1776_curated

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1776_curated_1
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17..406)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G483_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA80113.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
SCNpilot_expt_1000_bf_scaffold_1776_curated_2
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(725..4726)
DNA (4002bp) protein (1334aa)
Tax=BJP_IG2102_Flavobacteriales_34_12
SCNpilot_expt_1000_bf_scaffold_1776_curated_3
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4806..5459)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacillus cereus G9241 RepID=Q4MW94_BACCE
Uncharacterized protein {ECO:0000313|EMBL:AIF45422.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
SCNpilot_expt_1000_bf_scaffold_1776_curated_4
unknown

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comp(5471..6628)
DNA (1158bp) protein (386aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_5
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

Not on your lists

6905..8086
DNA (1182bp) protein (394aa)
Putative uncharacterized protein id=1888672 bin=GWE2_Clostridiales_32_10 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein
Tax=GWE2_Clostridiales_32_10_curated
SCNpilot_expt_1000_bf_scaffold_1776_curated_6
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(8209..9951)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C8I5_9FLAO
hypothetical protein
Tax=CG_Bacteroid_02
SCNpilot_expt_1000_bf_scaffold_1776_curated_7
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10310..10609
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003730BC8
Uncharacterized protein {ECO:0000313|EMBL:KGO80783.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1776_curated_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10665..10901
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372D528
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1776_curated_9
unknown

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comp(10909..11151)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_10
unknown

Not on your lists

comp(11255..11476)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374D6FB
SCNpilot_expt_1000_bf_scaffold_1776_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11593..12063)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368DEFE
DNA repair protein {ECO:0000313|EMBL:KIC89896.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA repair protein RadC
SCNpilot_expt_1000_bf_scaffold_1776_curated_12
unknown

Not on your lists

comp(12083..12391)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_13
unknown

Not on your lists

comp(12402..12863)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_14
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12935..13306)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24275.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_1776_curated_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13366..13800)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBW5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27043.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_1776_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13847..14323)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBW4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27042.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1776_curated_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14375..14740)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003687E7A
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
single stranded DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_1776_curated_18
unknown

Not on your lists

14769..15020
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

15257..16123
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Y0_9PORP
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_expt_1000_bf_scaffold_1776_curated_20
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16175..16654
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036AFA68
Uncharacterized protein {ECO:0000313|EMBL:KEQ29609.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
SCNpilot_expt_1000_bf_scaffold_1776_curated_21
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16775..17341
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN30502.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
SCNpilot_expt_1000_bf_scaffold_1776_curated_22
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17429..18838
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG6O-1 RepID=J8WCD3_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJV52613.1}; TaxID=1053192 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG6O-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1776_curated_23
unknown

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19074..19361
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_24
unknown

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comp(19376..19543)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_25
unknown

Not on your lists

20084..20602
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_26
Prevotella bergensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20825..21508)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PW48_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFA44402.1}; TaxID=585502 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bergensis DSM 17361.;"
fiber protein
SCNpilot_expt_1000_bf_scaffold_1776_curated_27
unknown

Not on your lists

comp(21812..22252)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1776_curated_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22276..25968)
DNA (3693bp) protein (1231aa)
RHS repeat-associated core domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDZ1_9SPHI
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:EHQ24331.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
YD repeat protein
Displaying 28 items

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