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SCNpilot_expt_1000_bf_scaffold_393_curated

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_393_curated_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1210)
DNA (1209bp) protein (403aa)
PKD domain containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAH2_CHIPD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ACU61176.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1694..2578)
DNA (885bp) protein (295aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY1_CHIPD
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ACU59353.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2578..2838)
DNA (261bp) protein (87aa)
Phosphopantetheine-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQJ7_9SPHI
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phosphopantetheine-binding protein; K02078 acyl carrier protein
SCNpilot_expt_1000_bf_scaffold_393_curated_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2847..4073)
DNA (1227bp) protein (409aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
beta-ketoacyl synthase n=1 Tax=Niabella aurantiaca RepID=UPI0003729144
Beta-ketoacyl synthase {ECO:0000313|EMBL:KIC95142.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_393_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4335..5063)
DNA (729bp) protein (243aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ44_9SPHI
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:AHF15866.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_393_curated_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5121..6665)
DNA (1545bp) protein (515aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3]
Phenylalanine/histidine ammonia-lyase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1I1_9SPHI
Phenylalanine/histidine ammonia-lyase {ECO:0000313|EMBL:EHQ30855.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_393_curated_7
unknown

Not on your lists

6763..6870
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_393_curated_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6875..8176)
DNA (1302bp) protein (434aa)
coenzyme F390 synthetase-like protein; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
AMP-dependent synthetase and ligase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1I2_9SPHI
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHQ30856.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_393_curated_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8556..9377
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3A93F
Uncharacterized protein {ECO:0000313|EMBL:KIC95834.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_393_curated_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

9447..10994
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002F870D2
Uncharacterized protein {ECO:0000313|EMBL:KIF32566.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_393_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11118..11984)
DNA (867bp) protein (289aa)
Aldose 1-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDC0_NIAKG
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEV99360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11995..12606)
DNA (612bp) protein (204aa)
WbqC-like family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI68_CHIPD
WbqC-like family protein
WbqC-like family protein {ECO:0000313|EMBL:ACU63630.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12905..13369
DNA (465bp) protein (155aa)
Water Stress and Hypersensitive response domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ31_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44361.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Water Stress and Hypersensitive response domain-containing protein
SCNpilot_expt_1000_bf_scaffold_393_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13935..14153)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00741.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14320..16584
DNA (2265bp) protein (755aa)
aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCC8_CHIPD
Aconitate hydratase {ECO:0000313|EMBL:ACU59511.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16786..17646)
DNA (861bp) protein (287aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8F7_9SPHI
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EHQ25875.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_393_curated_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17827..19008
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W321_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95734.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19060..19911
DNA (852bp) protein (284aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK60_NIAKG
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AEV96494.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19941..20978)
DNA (1038bp) protein (346aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQR6_9GAMM
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EIJ33709.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
TIR protein
SCNpilot_expt_1000_bf_scaffold_393_curated_20
unknown

Not on your lists

comp(21024..21542)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_393_curated_21
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21569..22627)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R707_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33372.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22821..23615)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003719891
Beta-propeller domains of methanol dehydrogenase {ECO:0000313|EMBL:KIC90683.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UPF0603 protein
SCNpilot_expt_1000_bf_scaffold_393_curated_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23640..24098)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB33_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_393_curated_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24117..24707)
DNA (591bp) protein (197aa)
LemA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB34_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44763.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
LemA family protein; K03744 LemA protein
SCNpilot_expt_1000_bf_scaffold_393_curated_25
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24762..25829)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361ABBC
Uncharacterized protein {ECO:0000313|EMBL:ETZ22442.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_393_curated_26
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25952..27310
DNA (1359bp) protein (453aa)
Oxidoreductase domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZ38_HALH1
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEE53692.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27445..28440
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003710792
hypothetical protein; K03478 hypothetical protein
YdjC family protein {ECO:0000313|EMBL:ACT95201.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_28
unknown

Not on your lists

comp(28441..28632)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_393_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28782..30104
DNA (1323bp) protein (441aa)
amidohydrolase n=1 Tax=Dyadobacter beijingensis RepID=UPI000360E956
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ACT91529.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_393_curated_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30112..30333)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41938.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Displaying items 1-30 of 60 in total

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