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SCNpilot_expt_1000_bf_scaffold_219_curated

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Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_219_curated_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBN4_PEDSD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADY52725.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_219_curated_2
unknown

Not on your lists

comp(712..1527)
DNA (816bp) protein (272aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
SCNpilot_expt_1000_bf_scaffold_219_curated_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1535..2287)
DNA (753bp) protein (251aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20); K01630 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
SCNpilot_expt_1000_bf_scaffold_219_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2295..3146)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DB57E
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_219_curated_5
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3143..3922)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003645ED5
Uncharacterized protein {ECO:0000313|EMBL:EJS65750.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-1.;"
Short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_219_curated_6
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4011..5729)
DNA (1719bp) protein (573aa)
Alpha-L-rhamnosidase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU7_9BACT
alpha-L-rhamnosidase family protein
Tax=RBG_16_Planctomycetes_64_10_curated
SCNpilot_expt_1000_bf_scaffold_219_curated_7
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

comp(5772..7238)
DNA (1467bp) protein (489aa)
Aldehyde Dehydrogenase; K07248 lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
Aldehyde dehydrogenase A, NAD-linked n=1 Tax=unidentified eubacterium SCB49 RepID=A6EN91_9BACT
Aldehyde dehydrogenase A, NAD-linked {ECO:0000313|EMBL:EDM45107.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
SCNpilot_expt_1000_bf_scaffold_219_curated_8
RLO_PLX_64_10, Bacteria

Not on your lists

comp(7245..8258)
DNA (1014bp) protein (338aa)
dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI000299F565
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_1000_bf_scaffold_219_curated_9
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8427..9323
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN4_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23767.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_219_curated_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9367..10095)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360CCD9
Esterase {ECO:0000313|EMBL:KIC92723.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
esterase
SCNpilot_expt_1000_bf_scaffold_219_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10209..10952)
DNA (744bp) protein (248aa)
ATPase involved in chromosome partitioning n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX64_SOLCM
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KIC91075.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
chromosome partitioning ATPase
SCNpilot_expt_1000_bf_scaffold_219_curated_12
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11152..11637
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase id=4011129 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
N-acetyltransferase GCN5
Tax=GWA2_Bacteroidetes_32_17_curated
SCNpilot_expt_1000_bf_scaffold_219_curated_13
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11804..12118
DNA (315bp) protein (105aa)
Membrane protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W195_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF10690.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_219_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12325..13362
DNA (1038bp) protein (346aa)
2-oxoglutarate synthase; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI00037F63CD
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:KIC96492.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_219_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14357..15244)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGA0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02739.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_219_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15539..16195
DNA (657bp) protein (219aa)
Peptidase M10A and M12B matrixin and adamalysin n=1 Tax=Niabella soli DSM 19437 RepID=H1NRN1_9SPHI
Peptidase M10 {ECO:0000313|EMBL:AHF15498.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase m10a and m12b matrixin and adamalysin
SCNpilot_expt_1000_bf_scaffold_219_curated_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16198..16788
DNA (591bp) protein (197aa)
Acyl carrier protein phosphodiesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF3_NIAKG
Acyl carrier protein phosphodiesterase
ACP phosphodiesterase {ECO:0000313|EMBL:KIC96342.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_219_curated_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16871..17440
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96341.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_219_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17448..18113
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02797.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_219_curated_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18138..19187
DNA (1050bp) protein (350aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815, ECO:0000256|SAAS:SAAS00048658};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-ACP synthase n=1 Tax=Pedobacter agri RepID=UPI00029A6576
SCNpilot_expt_1000_bf_scaffold_219_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19173..19859)
DNA (687bp) protein (229aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ7_NIAKG
SCNpilot_expt_1000_bf_scaffold_219_curated_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19946..20500)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC90991.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_219_curated_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20590..21231)
DNA (642bp) protein (214aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCJ9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90990.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
lysine exporter protein LysE/YggA
SCNpilot_expt_1000_bf_scaffold_219_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21329..22855)
DNA (1527bp) protein (509aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK0_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02540.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_219_curated_25
GWB1_OP11_41_15, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

23059..23427
DNA (369bp) protein (123aa)
Response regulator receiver n=1 Tax=Pedobacter sp. BAL39 RepID=A6E8D4_9SPHI
Response regulator receiver protein {ECO:0000313|EMBL:KKR93163.1}; TaxID=1618428 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_15.;"
response regulator
SCNpilot_expt_1000_bf_scaffold_219_curated_26
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23559..23843)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V621_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF09552.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_219_curated_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23966..24895
DNA (930bp) protein (310aa)
sugar kinase n=1 Tax=Segetibacter koreensis RepID=UPI000361A34E
PfkB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_219_curated_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24962..25483
DNA (522bp) protein (174aa)
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFU1_CHIPD
isoleucine patch superfamily carbonic anhydrase/acetyltransferase
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein {ECO:0000313|EMBL:ACU57924.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_219_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25587..26705
DNA (1119bp) protein (373aa)
aminomethyltransferase; K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aminomethyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF32_NIAKG
SCNpilot_expt_1000_bf_scaffold_219_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26801..27274
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF33_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02653.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 87 in total

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