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SCNpilot_expt_1000_bf_scaffold_990_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_990_curated_1
unknown

Not on your lists

comp(41..538)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_990_curated_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(549..1229)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YES6_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24343.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_990_curated_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1345..1740
DNA (396bp) protein (132aa)
SWIB complex BAF60b n=1 Tax=uncultured bacterium BLR19 RepID=C0INX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC94044.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_990_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1751..2011
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8W6_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28732.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_990_curated_5
unknown

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comp(2389..2520)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_990_curated_6
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2576..3550)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E43E3
Alcohol dehydrogenase {ECO:0000313|EMBL:KGO08625.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
alcohol dehydrogenase
SCNpilot_expt_1000_bf_scaffold_990_curated_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3629..4267)
DNA (639bp) protein (213aa)
Cyclic nucleotide-binding protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FFZ9_FLAJ1
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ABQ05864.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_1000_bf_scaffold_990_curated_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4331..4726)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3929 RepID=N9LS90_9GAMM
MerR family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_990_curated_9
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4916..5215
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z3S6_BELBD
Uncharacterized protein {ECO:0000313|EMBL:KEQ30174.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_990_curated_10
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5218..5556
DNA (339bp) protein (113aa)
UPF0060 membrane protein JoomaDRAFT_2378 n=1 Tax=Joostella marina DSM 19592 RepID=I3C6X0_9FLAO
UPF0060 membrane protein JoomaDRAFT_2378 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
membrane protein ynfA; K09771 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_990_curated_11
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5571..6008)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L3_9GAMM
tolA; outer membrane integrity protein
Uncharacterized protein {ECO:0000313|EMBL:KJK24551.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCNpilot_expt_1000_bf_scaffold_990_curated_12
unknown

Not on your lists

6690..6869
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_990_curated_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6962..7723
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKA8_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAL86343.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_990_curated_14
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7738..8649
DNA (912bp) protein (304aa)
Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKA9_CHIPD
AraC family transcriptional regulator {ECO:0000313|EMBL:GAL86342.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_990_curated_15
unknown

Not on your lists

comp(8651..8929)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_990_curated_16
Komagataella pastoris, Komagataella, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

9104..10039
DNA (936bp) protein (312aa)
Uncharacterized protein y4nL n=2 Tax=Komagataella pastoris RepID=F2QVN9_PICP7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAY70741.1}; TaxID=644223 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella.;" source="Komagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia; pastoris).;"
SCNpilot_expt_1000_bf_scaffold_990_curated_17
unknown

Not on your lists

10036..10179
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_990_curated_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10203..10496)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF72_CHIPD">RepID=C7PF72_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC89627.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_990_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10717..13224
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAN0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99210.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_990_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13203..14321
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAM9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99209.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_990_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14379..22031
DNA (7653bp) protein (2551aa)
PA14 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAM8_NIAKG
PA14 domain protein {ECO:0000313|EMBL:AEV99208.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PA14 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_990_curated_22
unknown

Not on your lists

22277..23005
DNA (729bp) protein (243aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_990_curated_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23028..29822
DNA (6795bp) protein (2265aa)
YD repeat protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAM6_NIAKG
YD repeat protein
YD repeat protein {ECO:0000313|EMBL:AEV99206.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 23 items

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