name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_421_curated_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3..644)
|
RNA methylase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Putative RNA methylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR65_CHIPD
Putative RNA methylase {ECO:0000313|EMBL:ACU64304.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
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SCNpilot_expt_1000_bf_scaffold_421_curated_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
806..1378
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
protein grpE; K03687 molecular chaperone GrpE
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
1431..2582
|
Chaperone protein DnaJ n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR67_CHIPD
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_4
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2584..3003)
|
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L4W0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KHD04168.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3163..4350)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7W9_NIAKG
integral membrane sensor signal transduction histidine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
4409..5476
|
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7X0_NIAKG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEV96908.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
5525..5728
|
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF11_CHIPD">RepID=C7PF11_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC93118.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_8
unknown
|
Not on your lists |
comp(6229..6420)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_421_curated_9
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(7405..8508)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
integral membrane sensor signal transduction histidine kinase
Y_Y_Y domain-containing protein,putative transcriptional regulator,GAF domain-containing protein id=2041397 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8650..9666)
|
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ5_NIAKG
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO45559.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
AraC family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10055..10492)
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003651D84
Uncharacterized protein {ECO:0000313|EMBL:ETZ21843.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
xanthan lyase
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_12
unknown
|
Not on your lists |
comp(10443..10706)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_421_curated_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10975..12333)
|
Chitinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB77_9SPHI
Putative hydrolase {ECO:0000313|EMBL:GAO41353.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12366..13952)
|
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB79_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO41352.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
lipoprotein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(13970..17452)
|
Putative outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB80_9SPHI
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO41351.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor plug
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17484..18491)
|
Fe2+-dicitrate sensor, membrane component n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVF4_SOLCM
Putative anti-sigma factor {ECO:0000313|EMBL:GAO41350.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Fe2+-dicitrate sensor, membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18544..19125)
|
RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHF5_9SPHI
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO41349.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
sigma-70 family RNA polymerase sigma factor
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19160..20098)
|
Chitinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB78_9SPHI
Putative glycosidase {ECO:0000313|EMBL:GAO44515.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
glycoside hydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_19
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
20640..23048
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003824F34
TonB-dependent receptor {ECO:0000313|EMBL:KGO92241.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
23251..24000
|
Transcriptional regulator, DeoR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8M4_NIAKG
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEW00196.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
24022..27447
|
TonB-dependent receptor n=1 Tax=Pedobacter agri RepID=UPI000299D66F
TonB-dependent receptor {ECO:0000313|EMBL:AHF16810.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-dependent receptor plug
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
27459..29291
|
glycan metabolism protein RagB n=1 Tax=Pedobacter agri RepID=UPI000299D498
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACU06329.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_23
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(29365..30339)
|
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EPR65683.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EPR65683.1};; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
UDP-glucose 4-epimerase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WNC3_9BACT
NAD-dependent epimerase/dehydratase
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_24
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
30477..31502
|
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AD02A
Uncharacterized protein {ECO:0000313|EMBL:KFF15842.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein; K08994 putative membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
comp(31565..32983)
|
amidohydrolase n=1 Tax=Eudoraea adriatica RepID=UPI00036A714B
hypothetical protein; K12941 aminobenzoyl-glutamate utilization protein B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
33103..33798
|
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB43_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:GAO42543.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_27
unknown
|
Not on your lists |
33835..34314
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_421_curated_28
unknown
|
Not on your lists |
comp(34744..35619)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_421_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
36144..36893
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037ADA85
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB39163.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
|
|
SCNpilot_expt_1000_bf_scaffold_421_curated_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
36913..38196
|
Acetyl-CoA hydrolase/transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TET5_NIAKG
4-hydroxybutyrate CoA-transferase {ECO:0000313|EMBL:KIC95132.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
acetyl-CoA hydrolase/transferase
|