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scnpilot_p_inoc_scaffold_1207_curated

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1207_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1200)
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Two-component system sensor histidine kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKC2_9SPHN
two-component system sensor histidine kinase
scnpilot_p_inoc_scaffold_1207_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1200..1943)
DNA (744bp) protein (248aa)
OmpR family two-component system response regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKC1_9SPHN
OmpR family two-component system response regulator
OmpR family two-component system response regulator {ECO:0000313|EMBL:BAK64984.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1207_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2088..2663
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKC0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64983.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1207_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2678..3115
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64982.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1207_curated_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3222..4118)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB192
LysR family transcriptional regulator {ECO:0000313|EMBL:AJR23585.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1207_curated_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4195..4803
DNA (609bp) protein (203aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN binding protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GAC3_9SPHN
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:KKC25688.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07006
scnpilot_p_inoc_scaffold_1207_curated_7
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4800..5210
DNA (411bp) protein (137aa)
glyoxalase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB581
Glyoxalase {ECO:0000313|EMBL:AJR23586.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_1207_curated_8
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5237..5566)
DNA (330bp) protein (110aa)
HxlR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B360D4
Transcriptional regulator, HxlR family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_p_inoc_scaffold_1207_curated_9
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5686..6549
DNA (864bp) protein (288aa)
quercetin 2,3-dioxygenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4929E
hypothetical protein; K06911
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_p_inoc_scaffold_1207_curated_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6622..6978
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E605_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_p_inoc_scaffold_1207_curated_11
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7064..9370)
DNA (2307bp) protein (769aa)
sulfatase; K01130 arylsulfatase [EC:3.1.6.1]
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003635C05
Arylsulfatase {ECO:0000313|EMBL:KFF02905.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
scnpilot_p_inoc_scaffold_1207_curated_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9388..10395)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH66_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47385.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10492..11400
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH8_9SPHN
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:BAK68352.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_1207_curated_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11496..13841)
DNA (2346bp) protein (782aa)
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MTX1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53263.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_1207_curated_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14323..14487
DNA (165bp) protein (55aa)
Sulphate transporter n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NB95_9SPHN
Putative sulfate transporter {ECO:0000313|EMBL:AJA10046.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
sulfate transporter
scnpilot_p_inoc_scaffold_1207_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14770..15192)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP23_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43259.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15353..16147
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP24_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43260.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_18
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16247..16639
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBT2_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS47691.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_19
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16890..17237
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKE5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB12653.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17498..19246
DNA (1749bp) protein (583aa)
ATP-dependent RNA helicase RhlE (EC:3.6.1.-); K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Putative helicase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIU8_9SPHN
Putative helicase {ECO:0000313|EMBL:GAD48072.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1207_curated_21
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20101..20556
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P9D4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49728.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_22
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20610..21893
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBU1_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD24682.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_1207_curated_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22010..23518
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBU3_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH43266.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1207_curated_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23608..24975
DNA (1368bp) protein (456aa)
Peptidase M48 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK42_9SPHN
TPR repeat-containing protein YfgC {ECO:0000313|EMBL:AKH43267.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
peptidase M48, Ste24p
scnpilot_p_inoc_scaffold_1207_curated_25
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24987..25724
DNA (738bp) protein (246aa)
Putative oxidoreductase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6S6_9SPHN
Putative oxidoreductase {ECO:0000313|EMBL:GAD48876.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
DsbA oxidoreductase
scnpilot_p_inoc_scaffold_1207_curated_26
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25882..27120
DNA (1239bp) protein (413aa)
Putative two-component histidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKQ6_9SPHN
Putative two-component histidine kinase {ECO:0000313|EMBL:GAD48877.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
histidine kinase
scnpilot_p_inoc_scaffold_1207_curated_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27117..27914
DNA (798bp) protein (266aa)
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2B0_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAD48878.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
two-component system LytT family response regulator
scnpilot_p_inoc_scaffold_1207_curated_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28034..28897
DNA (864bp) protein (288aa)
Putative nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:AKH43271.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AKH43271.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VS08_9SPHN
scnpilot_p_inoc_scaffold_1207_curated_29
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28894..29328
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003600CB2
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_p_inoc_scaffold_1207_curated_30
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29309..30034
DNA (726bp) protein (242aa)
Putative ribonuclease n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6S9_9SPHN
Putative ribonuclease {ECO:0000313|EMBL:GAD48881.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
ribonuclease T2 family protein
Displaying items 1-30 of 49 in total

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