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scnpilot_p_inoc_scaffold_654_curated

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_654_curated_1
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171..581)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8Q3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49497.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
scnpilot_p_inoc_scaffold_654_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(614..1531)
DNA (918bp) protein (306aa)
Putative oxidoreductase SadH {ECO:0000313|EMBL:AKH43825.1}; EC=1.-.-.- {ECO:0000313|EMBL:AKH43825.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
short-chain dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4DB34
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_654_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1536..2051)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJU8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43824.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_654_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2048..2566)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43824.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_654_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2761..4167
DNA (1407bp) protein (469aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA83_NOVAD
Enterobactin exporter EntS {ECO:0000313|EMBL:AKH43823.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
major facilitator transporter
scnpilot_p_inoc_scaffold_654_curated_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4303..5067
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKZ8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92100.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_654_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5210..6640
DNA (1431bp) protein (477aa)
Alpha-ketoglutaric semialdehyde dehydrogenase {ECO:0000313|EMBL:AKH43822.1}; EC=1.2.1.26 {ECO:0000313|EMBL:AKH43822.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
succinate semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate semialdehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA81_NOVAD
scnpilot_p_inoc_scaffold_654_curated_8
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6673..8238
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I6J1_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY60696.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
FAD linked oxidase domain-containing protein
scnpilot_p_inoc_scaffold_654_curated_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8241..9296
DNA (1056bp) protein (352aa)
ligW2; 5-carboxyvanillate decarboxylase; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
5-carboxyvanillate decarboxylase n=2 Tax=Sphingomonadaceae RepID=G2IQT4_9SPHN
Amidohydrolase {ECO:0000313|EMBL:AKH43821.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_654_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9384..10238
DNA (855bp) protein (285aa)
Quinone oxidoreductase 2 {ECO:0000313|EMBL:AKH43820.1}; EC=1.6.5.2 {ECO:0000313|EMBL:AKH43820.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Uncharacterized protein n=1 Tax=Pectobacterium wasabiae CFBP 3304 RepID=J8PQZ7_9ENTR
hypothetical protein
scnpilot_p_inoc_scaffold_654_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10314..11942
DNA (1629bp) protein (543aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT5_9SPHN
L-galactonate transporter {ECO:0000313|EMBL:AKH43819.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_654_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11947..13497
DNA (1551bp) protein (517aa)
Benzoylformate decarboxylase {ECO:0000313|EMBL:AKH43818.1}; EC=4.1.1.7 {ECO:0000313|EMBL:AKH43818.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
benzoylformate decarboxylase (EC:4.1.1.7); K01576 benzoylformate decarboxylase [EC:4.1.1.7]
Thiamine pyrophosphate enzyme-like TPP-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q4_NOVAD
scnpilot_p_inoc_scaffold_654_curated_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13498..14577)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKH43918.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_654_curated_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14906..16441)
DNA (1536bp) protein (512aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-]
Peptidase S1 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBH3_9SPHN
Peptidase S1 family protein {ECO:0000313|EMBL:GAD50811.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_654_curated_15
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16573..17418)
DNA (846bp) protein (282aa)
hypothetical protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Protein HflC n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPI1_9SPHN
HflC protein {ECO:0000313|EMBL:GAD50810.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_654_curated_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17422..18597)
DNA (1176bp) protein (392aa)
integral membrane proteinase; K04088 membrane protease subunit HflK [EC:3.4.-.-]
HflK protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZL4_9SPHN
HflK protein {ECO:0000313|EMBL:GAD50809.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_654_curated_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18706..19668
DNA (963bp) protein (321aa)
ATP-binding protein involved in chromosome partitioning n=2 Tax=Novosphingobium RepID=F6IIJ6_9SPHN
ATPases {ECO:0000313|EMBL:GAO53794.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
chromosome partitioning ATP-binding protein; K03593 ATP-binding protein involved in chromosome partitioning
scnpilot_p_inoc_scaffold_654_curated_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19691..21958
DNA (2268bp) protein (756aa)
Putative isoquinoline 1-oxidoreductase beta subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ94_9SPHN
Putative isoquinoline 1-oxidoreductase beta subunit {ECO:0000313|EMBL:GAD50807.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
scnpilot_p_inoc_scaffold_654_curated_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21985..23007
DNA (1023bp) protein (341aa)
Ferrochelatase {ECO:0000313|EMBL:AKH43834.1}; EC=4.99.1.1 {ECO:0000313|EMBL:AKH43834.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIJ4_9SPHN
scnpilot_p_inoc_scaffold_654_curated_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23112..23639)
DNA (528bp) protein (176aa)
GCN5-related N-acetyltransferase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y2B8_PARAH
Putative acetyltransferase {ECO:0000313|EMBL:GAO38765.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
GCN5-related N-acetyltransferase
scnpilot_p_inoc_scaffold_654_curated_21
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23703..24269)
DNA (567bp) protein (189aa)
Outer membrane protein/peptidoglycan-associated lipoprotein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CX78_CAUCE
Outer membrane protein/peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ENZ81101.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
OmpA/MotB domain-containing protein
scnpilot_p_inoc_scaffold_654_curated_22
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24426..24611)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPH7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50805.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_654_curated_23
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24665..25897
DNA (1233bp) protein (411aa)
tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Putative RNA methyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZJ9_9SPHN
Putative RNA methyltransferase {ECO:0000313|EMBL:GAD50804.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_654_curated_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25901..26440)
DNA (540bp) protein (180aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:AKH43838.1}; EC=1.8.4.11 {ECO:0000313|EMBL:AKH43838.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7T8_9SPHN
scnpilot_p_inoc_scaffold_654_curated_25
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26550..27416
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0487
Uncharacterized protein {ECO:0000313|EMBL:AKH43839.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_654_curated_26
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27484..27963
DNA (480bp) protein (160aa)
NTF2 enzyme family protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003124690
NTF2 enzyme family protein
Uncharacterized protein {ECO:0000313|EMBL:AAK24445.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
scnpilot_p_inoc_scaffold_654_curated_27
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28006..28857
DNA (852bp) protein (284aa)
N-carbamoylputrescine amidase (EC:3.5.1.53); K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
N-carbamoylputrescine amidase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VZS5_9SPHN
N-carbamoylputrescine amidase {ECO:0000313|EMBL:EJU12936.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
scnpilot_p_inoc_scaffold_654_curated_28
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28864..29361
DNA (498bp) protein (166aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8D2_9SPHN
2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase {ECO:0000313|EMBL:EHJ62472.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_p_inoc_scaffold_654_curated_29
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29603..30283
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBB7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50761.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
TonB-like protein; K03832 periplasmic protein TonB
scnpilot_p_inoc_scaffold_654_curated_30
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30362..31420
DNA (1059bp) protein (353aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCD8_9SPHN
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KEO89324.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
Displaying items 1-30 of 51 in total

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