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scnpilot_p_inoc_scaffold_2517_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2517_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(367..1782)
DNA (1416bp) protein (472aa)
RND transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C8E
Outer membrane protein OprM {ECO:0000313|EMBL:AKH44193.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative outer membrane protein
scnpilot_p_inoc_scaffold_2517_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1787..2878)
DNA (1092bp) protein (364aa)
Putative ABC transporter permease protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB3_9SPHN
Inner membrane transport permease YbhR {ECO:0000313|EMBL:AKH44194.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative ABC transporter permease; K09686 antibiotic transport system permease protein
scnpilot_p_inoc_scaffold_2517_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2878..4056)
DNA (1179bp) protein (393aa)
Putative ABC transporter permease protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB4_9SPHN
Inner membrane transport permease YbhS {ECO:0000313|EMBL:AKH44195.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative ABC transporter permease; K09686 antibiotic transport system permease protein
scnpilot_p_inoc_scaffold_2517_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4053..5837)
DNA (1785bp) protein (595aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB5_9SPHN
Putative ABC transporter ATP-binding protein YbhF {ECO:0000313|EMBL:AKH44196.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_2517_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6850)
DNA (990bp) protein (330aa)
HlyD family secretion protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB6_9SPHN
Multidrug resistance protein MdtN {ECO:0000313|EMBL:AKH44197.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
HlyD family secretion protein; K01993 HlyD family secretion protein
scnpilot_p_inoc_scaffold_2517_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7252..7779)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQB0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43792.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2517_curated_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8359..9102
DNA (744bp) protein (248aa)
Cell division ATP-binding protein FtsE n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBI6_9SPHN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:GAD50826.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein
scnpilot_p_inoc_scaffold_2517_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9099..9995
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7G2_ERYLH
Cell division ABC transporter subunit FtsX {ECO:0000313|EMBL:AKH43794.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09811 cell division transport system permease protein
scnpilot_p_inoc_scaffold_2517_curated_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..10536
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZN1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43795.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2517_curated_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10542..11225
DNA (684bp) protein (228aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7W5_9SPHN
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:GAD50823.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_2517_curated_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11222..12490
DNA (1269bp) protein (423aa)
iron transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A64
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:KHS47033.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
natural resistance-associated macrophage protein
scnpilot_p_inoc_scaffold_2517_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12507..13433)
DNA (927bp) protein (309aa)
prephenate dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
Prephenate dehydrogenase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGP4_9SPHN
Cyclohexadienyl dehydrogenase {ECO:0000313|EMBL:AKH43797.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_2517_curated_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..14515)
DNA (1086bp) protein (362aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBI3_9SPHN
scnpilot_p_inoc_scaffold_2517_curated_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14633..15736
DNA (1104bp) protein (368aa)
Homoserine O-acetyltransferase {ECO:0000313|EMBL:AKH43799.1}; EC=2.3.1.31 {ECO:0000313|EMBL:AKH43799.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7G7_ERYLH
scnpilot_p_inoc_scaffold_2517_curated_15
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15733..16323
DNA (591bp) protein (197aa)
Methionine biosynthesis protein MetW n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7W1_9SPHN
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:GAD50818.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
methionine biosynthesis protein MetW
scnpilot_p_inoc_scaffold_2517_curated_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16347..17108)
DNA (762bp) protein (254aa)
Protein fdhD homolog n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTC3_9SPHN
Formate dehydrogenase accessory protein {ECO:0000313|EMBL:AKH43801.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
formate dehydrogenase accessory protein FdhD; K02379 FdhD protein
scnpilot_p_inoc_scaffold_2517_curated_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17132..17359)
DNA (228bp) protein (76aa)
formate dehydrogenase subunit delta (EC:1.2.1.2); K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
Putative NAD-dependent formate dehydrogenase delta subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJK7_9SPHN
NADH-dependent formate dehydrogenase delta subunit FdsD {ECO:0000313|EMBL:AKH43802.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_2517_curated_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17356..19773)
DNA (2418bp) protein (806aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Putative NAD-dependent formate dehydrogenase alpha subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y656_9SPHN
Putative NAD-dependent formate dehydrogenase alpha subunit {ECO:0000313|EMBL:GAD48636.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Displaying 18 items

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