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SCNpilot_cont_300_bf_scaffold_1498_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1498_curated_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1256)
DNA (1254bp) protein (418aa)
mannitol dehydrogenase domain-containing protein; K00040 fructuronate reductase [EC:1.1.1.57]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000380787C
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26234.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1498_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1253..2719)
DNA (1467bp) protein (489aa)
altronate dehydratase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036DD3FE
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26235.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1498_curated_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2819..3847
DNA (1029bp) protein (343aa)
LacI family transcription regulator n=1 Tax=Sphingomonas melonis RepID=UPI000378C71F
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26236.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
LacI family transcription regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1498_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4032..5447
DNA (1416bp) protein (472aa)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glucuronate isomerase; K01812 glucuronate isomerase [EC:5.3.1.12]
glucuronate isomerase n=1 Tax=Sphingomonas melonis RepID=UPI00038108F6
SCNpilot_cont_300_bf_scaffold_1498_curated_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5467..6309
DNA (843bp) protein (281aa)
5-dehydro-4-deoxy-D-glucuronate isomerase {ECO:0000256|SAAS:SAAS00004530}; EC=5.3.1.17 {ECO:0000256|SAAS:SAAS00004530};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17); K01815 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
5-keto-4-deoxyuronate isomerase n=1 Tax=Sphingomonas melonis RepID=UPI000364928E
SCNpilot_cont_300_bf_scaffold_1498_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6306..7070
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
3-ketoacyl-ACP reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD639
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30130.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1498_curated_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7067..8077
DNA (1011bp) protein (337aa)
2-keto-3-deoxygluconate kinase n=1 Tax=Sphingomonas melonis RepID=UPI00035EE7D5
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30129.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
PfkB protein
SCNpilot_cont_300_bf_scaffold_1498_curated_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8064..9629
DNA (1566bp) protein (522aa)
Carboxylic ester hydrolase {ECO:0000256|RuleBase:RU361235}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361235};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
carboxylesterase, type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
carboxylesterase n=1 Tax=Sphingomonas melonis RepID=UPI000360C913
SCNpilot_cont_300_bf_scaffold_1498_curated_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9833..12394
DNA (2562bp) protein (854aa)
TonB-dependent receptor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CZV3_SPHYA
TonB-dependent receptor {ECO:0000313|EMBL:EKU76406.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
TonB-dependent receptor
Displaying 9 items

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