name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_1267_curated_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..770)
|
putative hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Putative hydroxymethylglutaryl-CoA lyase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C392_HYPNA
Tax=GWF1_Sphingomonadales_63_6_curated
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
859..1998
|
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKL6_9SPHN
L-carnitine dehydratase/bile acid-inducible protein F
Tax=GWF1_Sphingomonadales_63_6_curated
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_3
Sphingomonas sp. JE1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1995..3398
|
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:AJW29438.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AJW29438.1};; TaxID=1628059 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33 4.2.1.35); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKL5_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3395..4057
|
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036468ED
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_5
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4035..4673)
|
Putative transcriptional regulator, TetR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTZ8_9BRAD
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CCE09936.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
TetR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4772..5437
|
O-methyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZI3_9SPHN
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:AGH49155.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5383..6396)
|
NAD dependent epimerase/dehydratase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVA7_9SPHN
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12757.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
NAD-dependent epimerase/dehydratase
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6487..7383
|
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVA9_9SPHN
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12758.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7403..8551)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000377746A
Putative FAD-dependent monooxygenase {ECO:0000313|EMBL:ENN88169.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
monooxygenase, FAD-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_10
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8659..9360)
|
hypothetical protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H2Q5_GLUDA
Uncharacterized protein {ECO:0000313|EMBL:CAP54185.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_11
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9557..10318
|
putative 3-oxoacyl-[acyl-carrier-protein] reductase, Short-chain dehydrogenase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase, Short-chain dehydrogenase {ECO:0000313|EMBL:CAP63753.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CAP63753.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248ABA1
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10325..11236)
|
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBN7_SPHWW
alpha/beta hydrolase domain-containing protein
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ABQ69703.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_13
unknown
|
Not on your lists |
comp(11368..12450)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_1267_curated_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12545..13858)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Two-component system sensor histidine kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN29_9SPHN
two-component system sensor histidine kinase
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13855..14508)
|
OmpR family two-component system response regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN28_9SPHN
OmpR family two-component system response regulator
OmpR family two-component system response regulator {ECO:0000313|EMBL:BAK65476.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14588..15610
|
Heavy metal efflux system protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN27_9SPHN
heavy metal efflux system protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
Heavy metal efflux system protein {ECO:0000313|EMBL:BAK65475.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_17
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15610..18576
|
Heavy metal efflux system protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN26_9SPHN
Heavy metal efflux system protein {ECO:0000313|EMBL:BAK65474.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
heavy metal efflux system protein
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18601..18900
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN25_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65473.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18897..20114
|
Heavy metal efflux system protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN24_9SPHN
heavy metal efflux system protein
Heavy metal efflux system protein {ECO:0000313|EMBL:BAK65472.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_20
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20131..21726)
|
ATP-dependent DNA ligase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H8A7_9SPHN
DNA ligase, ATP-dependent, family {ECO:0000313|EMBL:EZP82043.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_21
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21728..22726)
|
RNA procession exonuclease-like protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ILD7_9SPHN
RNA procession exonuclease-like protein {ECO:0000313|EMBL:EQB12590.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein; K07577 putative mRNA 3-end processing factor
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_22 |
Not on your lists |
comp(22882..23406)
|
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W635_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU09949.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23612..25984
|
membrane-bound PQQ-dependent dehydrogenase; K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2]
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY22_9SPHN
Gcd protein {ECO:0000313|EMBL:GAN15319.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_24
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25991..26599)
|
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0ILC6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB10454.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
isochorismatase
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26937..28298
|
Ribosomal protein S6 modification protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6W0_9SPHN
ribosomal protein S6 modification protein
Ribosomal protein S6 modification protein {ECO:0000313|EMBL:AGH50254.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_26
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28295..29086
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5M8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50253.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_27
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29242..30027
|
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000310DDB9
Uncharacterized protein {ECO:0000313|EMBL:EZP56767.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein; K07090
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_28
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30041..31096)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GDT0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB01916.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative dibenzothiophene desulfurization enzyme B
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_29
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31111..32475)
|
Luciferase-like protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7E4_9SPHN
luciferase-like protein
Luciferase-like protein {ECO:0000313|EMBL:AGH50868.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_1267_curated_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32481..33218)
|
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HXH2_9SPHN
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:AJP70664.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|