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SCNpilot_cont_300_bf_scaffold_1217_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1217_curated_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..489
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035E4B05
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15840.1}; Flags: Fragment;; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
cytochrome c family protein
SCNpilot_cont_300_bf_scaffold_1217_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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515..1252
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035F6A35
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26873.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1217_curated_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1386..1778
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000381C7A5
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15838.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1217_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1850..2299
DNA (450bp) protein (150aa)
metal-binding protein n=2 Tax=Sphingomonas melonis RepID=UPI000382AF85
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26911.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1217_curated_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..4414
DNA (1230bp) protein (410aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00037CE3A4
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26871.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
outer membrane efflux protein
SCNpilot_cont_300_bf_scaffold_1217_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4411..5910
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F41DA
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26870.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
copper efflux system membrane protein CusB; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_300_bf_scaffold_1217_curated_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5907..9044
DNA (3138bp) protein (1046aa)
cation transporter n=1 Tax=Sphingomonas melonis RepID=UPI00036BAB66
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15833.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
SCNpilot_cont_300_bf_scaffold_1217_curated_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9044..9370
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036D44C4
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26869.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Copper binding periplasmic protein CusF
SCNpilot_cont_300_bf_scaffold_1217_curated_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9392..10159)
DNA (768bp) protein (256aa)
membrane protein n=1 Tax=Sphingomonas melonis RepID=UPI00036D1C93
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26868.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Glutaredoxin-related protein
SCNpilot_cont_300_bf_scaffold_1217_curated_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10223..10636
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037D0F87
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15830.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
SCNpilot_cont_300_bf_scaffold_1217_curated_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11289..12245)
DNA (957bp) protein (319aa)
cytochrome C n=1 Tax=Sphingomonas melonis RepID=UPI00037F3FE9
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26857.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putative cytochrome c
SCNpilot_cont_300_bf_scaffold_1217_curated_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12242..13129)
DNA (888bp) protein (296aa)
beta-lactamase n=1 Tax=Sphingomonas melonis RepID=UPI000362D419
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26856.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1217_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13151..13792)
DNA (642bp) protein (214aa)
DSBA oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI0003709E9B
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26855.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1217_curated_14
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13795..14421)
DNA (627bp) protein (209aa)
DSBA oxidoreductase n=1 Tax=Sphingomonas melonis RepID=UPI0003735FAB
DSBA oxidoreductase {ECO:0000313|EMBL:KHA64609.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
DSBA oxidoreductase
Displaying 14 items

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