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SCNpilot_cont_300_bf_scaffold_863_curated

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Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_863_curated_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT99_9SPHN
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_863_curated_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349..1137)
DNA (789bp) protein (263aa)
enoyl-CoA hydratase/isomeras; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000382C1E2
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ABC63072.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
SCNpilot_cont_300_bf_scaffold_863_curated_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1253..1672)
DNA (420bp) protein (140aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
methylmalonyl-CoA epimerase n=1 Tax=Sphingomonas melonis RepID=UPI0003746459
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26386.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_863_curated_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1745..3292)
DNA (1548bp) protein (516aa)
carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
methylmalonyl-CoA carboxyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B398BC
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:AJP74378.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_300_bf_scaffold_863_curated_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3383..4741
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5DF00
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AGH49922.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_863_curated_6
bacterium YEK0313, Bacteria

Not on your lists

comp(4753..5145)
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Ribonuclease VapC n=3 Tax=Sphingobium RepID=D4Z9B1_SPHJU
hypothetical protein
SCNpilot_cont_300_bf_scaffold_863_curated_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5142..5390)
DNA (249bp) protein (83aa)
Transcription factor n=1 Tax=Sphingobium baderi LL03 RepID=T0GJP2_9SPHN
Antitoxin {ECO:0000313|EMBL:CDN57485.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Rv0623 family protein transcription factor
SCNpilot_cont_300_bf_scaffold_863_curated_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5452..6468)
DNA (1017bp) protein (339aa)
dihydroflavonol-4-reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAB98
NADPH-dependent methylglyoxal reductase {ECO:0000313|EMBL:GAO56548.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
dihydroflavonol-4-reductase
SCNpilot_cont_300_bf_scaffold_863_curated_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6578..8515
DNA (1938bp) protein (646aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-coenzyme A synthetase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VC09_SPHWW
SCNpilot_cont_300_bf_scaffold_863_curated_10
unknown

Not on your lists

8655..8888
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4E614
SCNpilot_cont_300_bf_scaffold_863_curated_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9048..9698)
DNA (651bp) protein (217aa)
CRP/FNR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXB4_9SPHN
Putative CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:GAO40705.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
CRP/FNR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_863_curated_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9779..10612
DNA (834bp) protein (278aa)
taurine dioxygenase; K03119 taurine dioxygenase [EC:1.14.11.17]
alpha-ketoglutarate-dependent taurine dioxygenase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0E6C
Putative dioxygenase {ECO:0000313|EMBL:GAO40704.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_cont_300_bf_scaffold_863_curated_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..12322)
DNA (1590bp) protein (530aa)
acyl-CoA synthetase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9L9_CAUSK
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_863_curated_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12319..13884)
DNA (1566bp) protein (522aa)
acyl-CoA synthetase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B75F6B
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL29212.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
long-chain-fatty-acid--CoA ligase
SCNpilot_cont_300_bf_scaffold_863_curated_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13983..15236)
DNA (1254bp) protein (418aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADU46114.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADU46114.1};; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQK6_RHOPX
SCNpilot_cont_300_bf_scaffold_863_curated_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15321..15902
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DAD28
Sphingomonas taxi strain 30a NODE_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29758.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
TetR-family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_863_curated_17
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16122..17081
DNA (960bp) protein (320aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000368F531
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:ENZ80740.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCNpilot_cont_300_bf_scaffold_863_curated_18
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17163..18761
DNA (1599bp) protein (533aa)
choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003731EE5
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EJL24719.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_300_bf_scaffold_863_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18795..19715)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036187F4
Sphingomonas taxi strain 30a NODE_72, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27116.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_863_curated_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19911..21335
DNA (1425bp) protein (475aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003740267
Sphingomonas taxi strain 30a NODE_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29717.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_863_curated_21
unknown

Not on your lists

21406..21705
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003602DF3
SCNpilot_cont_300_bf_scaffold_863_curated_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21838..24933)
DNA (3096bp) protein (1032aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC522
Uncharacterized protein {ECO:0000313|EMBL:KHA65486.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_863_curated_23
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25853..27796)
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000370976C
Uncharacterized protein {ECO:0000313|EMBL:GAM02262.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
surface antigen (D15)
SCNpilot_cont_300_bf_scaffold_863_curated_24
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27965..28177)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI000289300B
Uncharacterized protein {ECO:0000313|EMBL:GAO40753.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_863_curated_25
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28295..28468
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6557B
Uncharacterized protein {ECO:0000313|EMBL:KHA65157.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_300_bf_scaffold_863_curated_26
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28606..29334
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZK8_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ81670.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_863_curated_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29403..30023)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360F3BE
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29662.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putative phage repressor
SCNpilot_cont_300_bf_scaffold_863_curated_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30116..30289
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD1B3
DNA, contig: SP630 {ECO:0000313|EMBL:GAN13908.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_863_curated_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30286..30600
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD1B4
Uncharacterized protein {ECO:0000313|EMBL:AJP70981.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_300_bf_scaffold_863_curated_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30664..31422)
DNA (759bp) protein (253aa)
molybdopterin-binding protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AFF7E
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28744.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
molybdopterin binding domain-containing protein
Displaying items 1-30 of 104 in total

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