ggKbase home page

SCNpilot_cont_300_bf_scaffold_7451_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7451_curated_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..491
DNA (489bp) protein (163aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4I1_9SPHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGH50945.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_7451_curated_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

484..1104
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBN9_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69705.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_7451_curated_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1107..2174
DNA (1068bp) protein (356aa)
NADH:flavin oxidoreductase; K10680 N-ethylmaleimide reductase [EC:1.-.-.-]
1,2-oxophytodienoate reductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E9B
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABQ69706.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_7451_curated_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2177..2794
DNA (618bp) protein (206aa)
Alpha/beta hydrolase fold protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1Y6_9SPHN
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AGH49796.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_7451_curated_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2835..3092
DNA (258bp) protein (86aa)
Epoxide hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A464_9SPHN
Epoxide hydrolase {ECO:0000313|EMBL:GAD49548.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_7451_curated_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3904..4701
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024897EC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49210.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_7451_curated_7
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4807..5568)
DNA (762bp) protein (254aa)
3-oxo-5-alpha-steroid 4-dehydrogenase 2 {ECO:0000313|EMBL:EUA69963.1}; EC=1.3.99.5 {ECO:0000313|EMBL:EUA69963.1};; TaxID=1299321 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii 1513.;"
3-oxo-5-alpha-steroid 4-dehydrogenase n=6 Tax=Mycobacterium abscessus RepID=I8AYD3_MYCAB
3-oxo-5-alpha-steroid 4-dehydrogenase 2
SCNpilot_cont_300_bf_scaffold_7451_curated_8
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5574..6353)
DNA (780bp) protein (260aa)
oxidoreductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BE70
glucose 1-dehydrogenase
Putative glucose 1-dehydrogenase {ECO:0000313|EMBL:CBH50631.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
SCNpilot_cont_300_bf_scaffold_7451_curated_9
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6448..6882
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YQ84_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD59657.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_300_bf_scaffold_7451_curated_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6897..7355
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYX8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH47873.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_7451_curated_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7352..7984)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024889F6
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:KGB56762.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7451_curated_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7977..8318)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYI6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB56761.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7451_curated_13
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8315..9301)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00036F6BB2
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:KGB56760.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_7451_curated_14
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9362..9469)
DNA (108bp) protein (36aa)
Luciferase family protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEU3_NOVAD
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABP64454.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Displaying 14 items

View Taxonomy