ggKbase home page

SCNpilot_cont_300_bf_scaffold_8868_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_8868_curated_1
Sphingomonas sp. Fr1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1081)
DNA (1080bp) protein (360aa)
Ubiquinone biosynthesis monooxygenase n=1 Tax=Sphingomonas sp. Fr1 RepID=G8HXE4_9SPHN
Ubiquinone biosynthesis monooxygenase {ECO:0000313|EMBL:AET62596.1}; TaxID=907061 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Fr1.;"
ubiquinone biosynthesis protein
SCNpilot_cont_300_bf_scaffold_8868_curated_2
Sphingomonas sp. Fr1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1081..1758)
DNA (678bp) protein (226aa)
TetR/AcrR family transcriptional regulator n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C249
TetR family transcriptional regulator {ECO:0000313|EMBL:AET62595.1}; Flags: Fragment;; TaxID=907061 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Fr1.;"
h16_A3218; TetR/AcrR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_8868_curated_3
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3221..3652
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037EEFE8
thioesterase superfamily protein
Uncharacterized protein {ECO:0000313|EMBL:KGD65779.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
SCNpilot_cont_300_bf_scaffold_8868_curated_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3658..4629)
DNA (972bp) protein (324aa)
Hydrolase, putative n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5F0_ERYLH
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KGB51989.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hydrolase
SCNpilot_cont_300_bf_scaffold_8868_curated_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4626..6230)
DNA (1605bp) protein (535aa)
Cyclopentanone 1,2-monooxygenase {ECO:0000313|EMBL:AJA11724.1}; EC=1.14.13.16 {ECO:0000313|EMBL:AJA11724.1};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Cyclohexanone monooxygenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU16_PARL1
cyclohexanone monooxygenase
SCNpilot_cont_300_bf_scaffold_8868_curated_6
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6227..7840)
DNA (1614bp) protein (538aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
4-coumarate--CoA ligase, putative n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5F2_ERYLH
Acyl-CoA synthetase {ECO:0000313|EMBL:KCZ60718.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
SCNpilot_cont_300_bf_scaffold_8868_curated_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7858..8820)
DNA (963bp) protein (321aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDF7_9SPHN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJA11726.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
acyl-CoA dehydrogenase
Displaying 7 items

View Taxonomy