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SCNpilot_cont_300_bf_scaffold_443_curated

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Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_443_curated_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172..828
DNA (657bp) protein (219aa)
hydrolase n=1 Tax=Alphaproteobacteria RepID=UPI000262C6E4
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:CCA90765.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_443_curated_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

967..1215
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEN8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90763.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_443_curated_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1212..3155
DNA (1944bp) protein (648aa)
Amidohydrolase 3 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEN7_9SPHN
amidohydrolase 3; K07047
Amidohydrolase 3 {ECO:0000313|EMBL:CCA90762.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_443_curated_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3182..4084
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D6J6_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:GAO53337.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4084..4515
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CLP6_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73189.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4508..5869
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEN4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90759.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_443_curated_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5886..6338
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEN3_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90758.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_443_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6332..6571
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D2F5_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73187.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7185..8054
DNA (870bp) protein (290aa)
OmpA-family protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003147FB4
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ABQ67538.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_443_curated_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8290..8484
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376211A
Uncharacterized protein {ECO:0000313|EMBL:GAO40684.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8802..9191)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036510A1
Sphingomonas taxi strain 30a NODE_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28586.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9188..10012)
DNA (825bp) protein (275aa)
nitrilase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB06A
Nitrilase {ECO:0000313|EMBL:AJP72463.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCNpilot_cont_300_bf_scaffold_443_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10009..10266)
DNA (258bp) protein (86aa)
glutaredoxin n=1 Tax=Sphingomonas melonis RepID=UPI00036C816A
Sphingomonas taxi strain 30a NODE_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28587.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glutaredoxin
SCNpilot_cont_300_bf_scaffold_443_curated_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10298..11011)
DNA (714bp) protein (238aa)
amidophosphoribosyltransferase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289A21B
Amidophosphoribosyltransferase {ECO:0000313|EMBL:AJP72465.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative amidophosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_443_curated_15
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11085..11885
DNA (801bp) protein (267aa)
Methyltransferase domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXP3_9SPHN
Putative methyltransferase {ECO:0000313|EMBL:GAM00752.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
type 11 methyltransferase
SCNpilot_cont_300_bf_scaffold_443_curated_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11974..12330)
DNA (357bp) protein (119aa)
response regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B43AEE
Response regulator {ECO:0000313|EMBL:EZP54790.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
two-component hybrid sensor and regulator
SCNpilot_cont_300_bf_scaffold_443_curated_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12414..14810)
DNA (2397bp) protein (799aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037346C1
Uncharacterized protein {ECO:0000313|EMBL:AIT06442.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
multi-sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_443_curated_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14807..16111)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003617DD8
Signal peptide protein {ECO:0000313|EMBL:AIT08118.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
diguanylate cyclase/phosphodiesterase with extracellular sensor
SCNpilot_cont_300_bf_scaffold_443_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16710..18185)
DNA (1476bp) protein (492aa)
FAD dependent oxidoreductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3D5
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28707.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
monooxygenase flavin-binding family protein rbh
SCNpilot_cont_300_bf_scaffold_443_curated_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18255..22454)
DNA (4200bp) protein (1400aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B47A1C
DNA, contig: SP648 {ECO:0000313|EMBL:GAN14953.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22454..24490)
DNA (2037bp) protein (679aa)
Surface antigen family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXP9_9SPHN
Surface antigen family protein {ECO:0000313|EMBL:EZP54786.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
surface antigen (D15); K07278 outer membrane protein
SCNpilot_cont_300_bf_scaffold_443_curated_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24669..25370
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003747D5B
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACG79658.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_443_curated_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25608..26576
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D32F6
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12224.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
efflux pump periplasmic linker protein; K03585 membrane fusion protein
SCNpilot_cont_300_bf_scaffold_443_curated_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26580..29816
DNA (3237bp) protein (1079aa)
multidrug transporter n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037CF527
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28999.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
SCNpilot_cont_300_bf_scaffold_443_curated_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30366..31214
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003760A90
Transporter {ECO:0000313|EMBL:AJP73764.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
outer membrane efflux protein
SCNpilot_cont_300_bf_scaffold_443_curated_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31299..31610
DNA (312bp) protein (104aa)
Tryptophan-rich sensory protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1INP0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:GAO39606.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_443_curated_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31610..32683
DNA (1074bp) protein (358aa)
poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WJ94_9BRAD
Putative polyhydroxyalkanoate synthase {ECO:0000313|EMBL:GAO39607.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_cont_300_bf_scaffold_443_curated_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32680..33219
DNA (540bp) protein (180aa)
acetyltransferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA796
Putative acetyltransferase {ECO:0000313|EMBL:GAO39608.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
GCN5-like N-acetyltransferaser
SCNpilot_cont_300_bf_scaffold_443_curated_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33316..34107
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNI6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO39609.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
PGAP1 family protein
SCNpilot_cont_300_bf_scaffold_443_curated_30
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34418..34822)
DNA (405bp) protein (135aa)
Granule-associated 11 kDa protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBD2
Phasin family protein {ECO:0000313|EMBL:EZP57334.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
Displaying items 1-30 of 148 in total

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