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SCNpilot_cont_300_bf_scaffold_1655_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1655_curated_1
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..412
DNA (411bp) protein (137aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA0_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_cont_300_bf_scaffold_1655_curated_2
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(532..1089)
DNA (558bp) protein (186aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Isopropylmalate isomerase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYP6_9SPHN
SCNpilot_cont_300_bf_scaffold_1655_curated_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1086..1508)
DNA (423bp) protein (141aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPK4_9SPHN
Transcriptional regulator of marR family {ECO:0000313|EMBL:GAO55023.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1655_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1620..2540
DNA (921bp) protein (307aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX19_9SPHN
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ENY83000.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_cont_300_bf_scaffold_1655_curated_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2585..3712
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ1_9SPHN
Alpha/beta hydrolase {ECO:0000313|EMBL:KGB58651.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1655_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3718..4722
DNA (1005bp) protein (335aa)
Aminoglycoside phosphotransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J2_9SPHN
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ENY80383.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_1655_curated_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4719..6020
DNA (1302bp) protein (434aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
Enolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW1_9SPHN
SCNpilot_cont_300_bf_scaffold_1655_curated_8
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6020..6934
DNA (915bp) protein (305aa)
D-3-phosphoglycerate dehydrogenase SerA3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPK9_9SPHN
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_300_bf_scaffold_1655_curated_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6934..7632
DNA (699bp) protein (233aa)
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:GAO55029.1}; EC=3.1.1.24 {ECO:0000313|EMBL:GAO55029.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA8_9SPHN
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_1655_curated_10
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7650..8432
DNA (783bp) protein (261aa)
short-chain dehydrogenase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039BCFB4
oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AFT71122.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCNpilot_cont_300_bf_scaffold_1655_curated_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8443..8937)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53229.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1655_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9043..11262
DNA (2220bp) protein (740aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY80390.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1655_curated_13
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12258..12650
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB7_9SPHN
Ketosteroid isomerase-related protein {ECO:0000313|EMBL:KGB53223.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1655_curated_14
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12666..13322
DNA (657bp) protein (219aa)
Transposase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYR4_9SPHN
transposase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_1655_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13441..14058
DNA (618bp) protein (206aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPM3_9SPHN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY80400.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying 15 items

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