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SCNpilot_cont_300_bf_scaffold_225_curated

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_225_curated_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2289)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HEB4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11327.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
methylase/helicase
SCNpilot_cont_300_bf_scaffold_225_curated_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2381..2575)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ92_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KEZ19426.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..2942)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EYV1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV09140.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_4
unknown

Not on your lists

3185..3523
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_225_curated_5
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3520..4620
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037A6092
Uncharacterized protein {ECO:0000313|EMBL:GAJ37425.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
XRE family transcripitonal regulator
SCNpilot_cont_300_bf_scaffold_225_curated_6
unknown

Not on your lists

4760..5074
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_225_curated_7
unknown

Not on your lists

5078..5515
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_225_curated_8
unknown

Not on your lists

5508..6041
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_225_curated_9
unknown

Not on your lists

6038..7519
DNA (1482bp) protein (494aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_225_curated_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..10752)
DNA (2739bp) protein (913aa)
Putative CadC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKX4_9SPHN
putative CadC family transcriptional regulator
Putative CadC family transcriptional regulator {ECO:0000313|EMBL:BAK67526.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_300_bf_scaffold_225_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10859..11581
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5F0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82762.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_12
unknown

Not on your lists

11605..12777
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C3CBC
SCNpilot_cont_300_bf_scaffold_225_curated_13
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13381..15669)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y4P2_KETVW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO42399.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_300_bf_scaffold_225_curated_14
unknown

Not on your lists

15829..16053
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_225_curated_15
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16195..18024)
DNA (1830bp) protein (610aa)
ATP-dependent OLD family endonuclease n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AC23_BURGB
ATP-dependent OLD family endonuclease
ATP-dependent OLD family endonuclease {ECO:0000313|EMBL:ACR29915.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
SCNpilot_cont_300_bf_scaffold_225_curated_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18547..18861)
DNA (315bp) protein (105aa)
Plasmid stabilization system protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VRV3_9SPHN
ParE toxin protein {ECO:0000313|EMBL:GAO52924.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
plasmid stabilization system protein
SCNpilot_cont_300_bf_scaffold_225_curated_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18863..19120)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPQ6_SPHAL
ParD protein {ECO:0000313|EMBL:GAO52923.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_18
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19648..21066)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NL85_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40205.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21255..22721)
DNA (1467bp) protein (489aa)
Resolvase domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3Y3_9SPHN
resolvase domain-containing protein
Resolvase domain-containing protein {ECO:0000313|EMBL:AGH50456.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_225_curated_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23013..23561)
DNA (549bp) protein (183aa)
Cytochrome b561 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILK3_9SPHN
cytochrome b561
Cytochrome b561 {ECO:0000313|EMBL:BAK67596.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_300_bf_scaffold_225_curated_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24115..25164)
DNA (1050bp) protein (350aa)
ABC transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB8E
VacJ-like lipoprotein {ECO:0000313|EMBL:EZP57397.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
vacJ; surface lipoprotein; K04754 lipoprotein
SCNpilot_cont_300_bf_scaffold_225_curated_22
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25900..26190
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PDM2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85234.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
redoxin
SCNpilot_cont_300_bf_scaffold_225_curated_23
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26209..26418
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N8R239_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ95814.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
putative lipoprotein
SCNpilot_cont_300_bf_scaffold_225_curated_24
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26409..27788
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PB06_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85236.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_25
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27788..28726
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P167_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81886.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
SCNpilot_cont_300_bf_scaffold_225_curated_26
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28726..30819
DNA (2094bp) protein (698aa)
thiol:disulfide interchange protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B46684
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KFG91982.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
cytochrome c biogenesis transmembrane protein
SCNpilot_cont_300_bf_scaffold_225_curated_27
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30956..32914)
DNA (1959bp) protein (653aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IF22_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KHK93511.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_225_curated_28
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33222..34064)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EGX4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ59263.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_225_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35503..35826
DNA (324bp) protein (108aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NCJ1_9GAMM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGG88369.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_300_bf_scaffold_225_curated_30
Sphingomonas sp. A4, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36164..36274
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3Q1_9SPHN
Putative transposase {ECO:0000313|EMBL:BAE93946.1}; TaxID=223555 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A4.;"
hypothetical protein
Displaying items 1-30 of 131 in total

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