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SCNpilot_cont_300_bf_scaffold_251_curated

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Displaying items 1-30 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_251_curated_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..888)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035FE58F
Sphingomonas taxi strain 30a NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28145.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein; K06923
SCNpilot_cont_300_bf_scaffold_251_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(920..2920)
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000370C003
Uncharacterized protein {ECO:0000313|EMBL:AIT06453.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_251_curated_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2913..4259)
DNA (1347bp) protein (449aa)
Fis family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0BB
Sphingomonas taxi strain 30a NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28106.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
two-component system NtrC family response regulator
SCNpilot_cont_300_bf_scaffold_251_curated_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4256..6301)
DNA (2046bp) protein (682aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:AJP73799.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
PEP-CTERM system histidine kinase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA198
multi-sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_251_curated_5
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6315..7703)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035C179E
Sugar transferase {ECO:0000313|EMBL:KHA64029.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
sugar transferase
SCNpilot_cont_300_bf_scaffold_251_curated_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7855..8907
DNA (1053bp) protein (351aa)
mannose-1-phosphate guanyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B64A40
Nucleotidyl transferase family protein {ECO:0000313|EMBL:EZP54770.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
mannose-1-phosphate guanylyltransferase
SCNpilot_cont_300_bf_scaffold_251_curated_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8981..9280
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B604D7
Uncharacterized protein {ECO:0000313|EMBL:KHA64378.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_251_curated_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9358..10023
DNA (666bp) protein (222aa)
Response regulator n=1 Tax=Sphingomonas sp. S17 RepID=F3WTT9_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAM02562.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_300_bf_scaffold_251_curated_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10039..11409
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
histidine kinase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036108AA
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_251_curated_10
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11535..12953
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI0003783C03
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46635.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
sensory box-containing diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_251_curated_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12950..13945)
DNA (996bp) protein (332aa)
alkane 1-monooxygenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B311EE
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13373.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
luciferase-like protein
SCNpilot_cont_300_bf_scaffold_251_curated_12
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14056..14703
DNA (648bp) protein (216aa)
HAD family hydrolase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002888B8C
HAD family hydrolase {ECO:0000313|EMBL:KHA64381.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
pyrimidine 5'-nucleotidase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_300_bf_scaffold_251_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14700..15521
DNA (822bp) protein (274aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B607C0
SCNpilot_cont_300_bf_scaffold_251_curated_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15552..17012)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037EFADD
Membrane protein {ECO:0000313|EMBL:AIT08087.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_251_curated_15
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17376..18341
DNA (966bp) protein (322aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
fructose 1,6-bisphosphatase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B43478
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_300_bf_scaffold_251_curated_16
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18343..19062
DNA (720bp) protein (240aa)
CAAX amino terminal protease family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTT0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM02571.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
protease, CAAX amino terminal family
SCNpilot_cont_300_bf_scaffold_251_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19115..20677
DNA (1563bp) protein (521aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J5_9SPHN
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ENY80388.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_251_curated_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20681..20959)
DNA (279bp) protein (93aa)
chorismate mutase n=1 Tax=Sphingomonas melonis RepID=UPI000373E80A
Sphingomonas taxi strain 30a NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27638.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
chorismate mutase
SCNpilot_cont_300_bf_scaffold_251_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21067..22077
DNA (1011bp) protein (337aa)
octaprenyl-diphosphate synthase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
farnesyltranstransferase n=1 Tax=Sphingomonas melonis RepID=UPI00035EC2A3
Farnesyltranstransferase {ECO:0000313|EMBL:AIT06607.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_251_curated_20
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22071..22445)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B63CEF
Uncharacterized protein {ECO:0000313|EMBL:EXS71400.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_251_curated_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22505..23674
DNA (1170bp) protein (390aa)
glycoside hydrolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA09D
DNA, contig: SP646 {ECO:0000313|EMBL:GAN14830.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
putative glycosyltransferase
SCNpilot_cont_300_bf_scaffold_251_curated_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23659..24027)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6284F
Uncharacterized protein {ECO:0000313|EMBL:AJP70877.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_251_curated_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24037..24993)
DNA (957bp) protein (319aa)
preprotein translocase subunit SecF n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B49237
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
secF; preprotein translocase SecF subunit; K03074 preprotein translocase subunit SecF
SCNpilot_cont_300_bf_scaffold_251_curated_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25010..26614)
DNA (1605bp) protein (535aa)
preprotein translocase subunit SecD n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037BB46E
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
SCNpilot_cont_300_bf_scaffold_251_curated_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26616..26954)
DNA (339bp) protein (113aa)
preprotein translocase subunit YajC n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B568D6
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AIT05567.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
yajC; preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
SCNpilot_cont_300_bf_scaffold_251_curated_26
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27077..27382
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI000287A703
Uncharacterized protein {ECO:0000313|EMBL:ETW99246.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_251_curated_27
unknown

Not on your lists

27704..28081
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_251_curated_28
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28078..28764
DNA (687bp) protein (229aa)
Response regulator n=1 Tax=Sphingomonas sp. S17 RepID=F3X001_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAL99810.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_300_bf_scaffold_251_curated_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28809..30113
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
HAMP domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZZ9_9SPHN
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_251_curated_30
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30157..30636)
DNA (480bp) protein (160aa)
peroxiredoxin n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361E91D
alkyl hydroperoxide reductase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying items 1-30 of 328 in total

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