name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_231_curated_1
unknown
|
Not on your lists |
1..66
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_231_curated_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(111..1355)
|
acyl-CoA dehydrogenase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002ECB602
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:KGB53095.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
acyl-CoA dehydrogenase
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1454..2356)
|
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1S2_9SPHN
LysR family transcriptional regulator {ECO:0000313|EMBL:KGB59069.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
lysr family transcription regulator
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_4
unknown
|
Not on your lists |
comp(2353..2697)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_231_curated_5
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2886..3827)
|
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FHT0_9BURK
Arylesterase {ECO:0000313|EMBL:KFL52896.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3955..6912)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F2422
TonB-dependent receptor {ECO:0000313|EMBL:KGB56782.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
TonB-dependent receptor
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7054..7752
|
Cyclic nucleotide-binding protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2N5_HYPNA
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KGB56781.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
cyclic nucleotide-binding protein; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7830..8885
|
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YSB1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:AJA09741.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_9
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9081..9458
|
Integrase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GBN6_9SPHN
Integrase family protein {ECO:0000313|EMBL:KFG89318.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
integrase family protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9433..9711
|
integrase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C104
Integrase {ECO:0000313|EMBL:KFD27686.1}; Integrase family protein {ECO:0000313|EMBL:KEZ16841.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
integrase family protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(9852..10340)
|
DltE n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGX1_9BACT
Cytochrome C553 {ECO:0000313|EMBL:AKD03557.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10714..13050)
|
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
transketolase, central region; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5G6_SPHWW
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13091..14227)
|
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBU2_SPHWW
dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein {ECO:0000313|EMBL:ABQ69758.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14264..15382)
|
monooxygenase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00035FD98E
Monooxygenase, FAD-binding {ECO:0000313|EMBL:EZP71995.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15500..16537)
|
gluconolactonase (EC:3.1.1.17)
Gluconolactonase {ECO:0000313|EMBL:ABQ68662.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ABQ68662.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Gluconolactonase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8P6_SPHWW
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_16
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16548..17480)
|
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8P7_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ68663.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17706..18746
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8Q4_SPHWW
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABQ68670.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_18
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18743..19525
|
Short chain dehydrogenase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4H3_CAUCN
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:AAK23267.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_19
unknown
|
Not on your lists |
comp(19518..20396)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_231_curated_20
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20651..22438)
|
hypothetical protein; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
thiamine pyrophosphate protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F4E5C
Thiamine pyrophosphate protein {ECO:0000313|EMBL:EQB08691.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_21
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22564..23088)
|
Cytochrome C family protein, di-heme cytochrome C (Class I) n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAE0_METSZ
Cytochrome C family protein, di-heme cytochrome C (Class I) {ECO:0000313|EMBL:CCD31945.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
cytochrome c class I
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23118..23465)
|
cytochrome C n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003774733
Cytochrome c oxidase subunit 2 {ECO:0000313|EMBL:CEG06994.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
cytochrome c protein, class I
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23650..24252
|
isochorismatase n=1 Tax=Sphingomonas elodea RepID=UPI0002631D6D
Isochorismatase family protein {ECO:0000313|EMBL:EZP74353.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
isochorismatase hydrolase
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_24
unknown
|
Not on your lists |
comp(24274..24405)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_231_curated_25
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24558..25157
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WHV5_9SPHN
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32310.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein; K08995 putative membrane protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_26
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25161..25955)
|
UPI0003D06638 related cluster n=1 Tax=unknown RepID=UPI0003D06638
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC56661.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_27
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25952..26926)
|
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBU6_AZOL4
Membrane protein {ECO:0000313|EMBL:KJR61819.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_28
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26923..27498)
|
Cytochrome c class I n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJZ0_METS4
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III
Cytochrome c class I {ECO:0000313|EMBL:ACA17404.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_29
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27476..29383)
|
Methanol dehydrogenase n=2 Tax=Mesorhizobium RepID=V7G6S7_9RHIZ
Methanol dehydrogenase {ECO:0000313|EMBL:ESY05138.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
PQQ-dependent dehydrogenase, methanol/ethanol family
|
|
SCNpilot_cont_300_bf_scaffold_231_curated_30
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29380..29718)
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GPT3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05881.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
cytochrome c1 protein
|