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SCNpilot_expt_300_bf_scaffold_753_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_753_curated_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439..1104)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6AK68_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EWC41218.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_753_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1101..4064)
DNA (2964bp) protein (988aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 6077 RepID=U9AC67_PSEAI
N-6 DNA methylase {ECO:0000313|EMBL:GAO23799.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
N-6 DNA methylase
SCNpilot_expt_300_bf_scaffold_753_curated_3
unknown

Not on your lists

4136..4348
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_753_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4861..8370)
DNA (3510bp) protein (1170aa)
DEAD/DEAH box helicase n=1 Tax=Rhizobium radiobacter RepID=UPI0003756DA8
DEAD/DEAH box helicase {ECO:0000313|EMBL:EPR21213.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
DEAD/DEAH box helicase-like protein
SCNpilot_expt_300_bf_scaffold_753_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8354..9133)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AY64_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EMS95906.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_753_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9254..10150)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XNI3_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU53864.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_300_bf_scaffold_753_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10150..11229)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DX9_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46952.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_expt_300_bf_scaffold_753_curated_8
unknown

Not on your lists

comp(11393..11803)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_753_curated_9
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11843..12208
DNA (366bp) protein (122aa)
Transcriptional regulator, XRE family n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JC78_BURP8
Putative transcriptional regulator {ECO:0000313|EMBL:KDM68374.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
XRE family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_753_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12238..13533
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTI3_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ44880.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_expt_300_bf_scaffold_753_curated_11
CG_ACD39_01, ACD39, Bacteria

Not on your lists

13537..14880
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QR25_METTR
hypothetical protein
Tax=CG_ACD39_01
SCNpilot_expt_300_bf_scaffold_753_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14930..15178)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIE8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88988.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_753_curated_13
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15198..16409)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH91_ACIET
DNA-binding protein {ECO:0000313|EMBL:KGE06229.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_753_curated_14
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16406..17056)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH90_ACIET
Alpha/beta hydrolase {ECO:0000313|EMBL:KEA58858.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
phage-like protein
SCNpilot_expt_300_bf_scaffold_753_curated_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17454..17876
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_300_bf_scaffold_753_curated_16
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18444..19271
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE251
Uncharacterized protein {ECO:0000313|EMBL:AJP47699.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
Displaying 16 items

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