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SCN18_14_9_16_R2_B_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_165_1
unknown

Not on your lists

3..71
DNA (69bp) protein (23aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_165_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..1659)
DNA (1581bp) protein (527aa)
manganese transporter n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000379051E
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
manganese transport protein MntH
SCN18_14_9_16_R2_B_scaffold_165_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1656..2150)
DNA (495bp) protein (165aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G8K3_9BRAD
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_4
unknown

Not on your lists

2407..4308
DNA (1902bp) protein (634aa)

This feature has no annotations

SCN18_14_9_16_R2_B_scaffold_165_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4348..5841)
DNA (1494bp) protein (498aa)
flavin-containing monooxygenase (EC:1.14.-.-)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBD0_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5841..6665)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YZ5_SOLUE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_7
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6685..7041)
DNA (357bp) protein (119aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAR9_ANASK
glutathione-dependent formaldehyde-activating protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_8
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7061..8323)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000370391F
phosphonoacetate hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8455..10134
DNA (1680bp) protein (560aa)
Na/Pi cotransporter II-related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK00_9PROT
Na/Pi cotransporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10207..11400
DNA (1194bp) protein (398aa)
Cyclic nucleotide-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131K0_RHOPS
cyclic nucleotide-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11397..12350
DNA (954bp) protein (318aa)
Amidinotransferase n=1 Tax=Streptomyces griseus XylebKG-1 RepID=G0PW04_STRGR
amidinotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_12
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

comp(12347..13648)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000365E6A2
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13656..14900)
DNA (1245bp) protein (415aa)
glycosyl transferase n=1 Tax=Methylocystis parvus RepID=UPI0003752F6C
glycosyl transferase family 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_14
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..15630)
DNA (717bp) protein (239aa)
Probable glycolipid ABC exporter (DevE) family, ATP-binding protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JL91_SYNJB
devA; glycolipid ABC exporter (DevE) family ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_15
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15634..16899)
DNA (1266bp) protein (422aa)
DevC protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UL89_CYAP2
DevC protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_16
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16899..17861)
DNA (963bp) protein (321aa)
Multidrug resistance efflux pump-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J392_POLGS
Multidrug resistance efflux pump-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_17
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17939..19063)
DNA (1125bp) protein (375aa)
Sugar transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QZC8_9BURK
polysaccharide biosynthesis/export family protein
Polysaccharide biosynthesis/export family protein {ECO:0000313|EMBL:AIO34040.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
SCN18_14_9_16_R2_B_scaffold_165_18
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19142..19552)
DNA (411bp) protein (137aa)
Anti-sigma factor antagonist n=7 Tax=Bacteria RepID=F7UNW3_SYNYG
anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_19
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19549..20583)
DNA (1035bp) protein (345aa)
Ceramide glucosyltransferase (EC:2.4.1.80)
Ceramide glucosyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVJ2_HYPDA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_20
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(20698..21480)
DNA (783bp) protein (261aa)
ABC transporter related n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJW1_METSB
ABC transporter-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_21
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21458..22333)
DNA (876bp) protein (292aa)
ABC-2 type transporter n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJW2_METSB
ABC-2 type transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_trna_1
unknown

Not on your lists

comp(22365..22436)
DNA (72bp)
transferRNA Lys
SCN18_14_9_16_R2_B_scaffold_165_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22524..23030)
DNA (507bp) protein (169aa)
kdtB; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Coenzyme A biosynthesis protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKX0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_23
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23101..25902)
DNA (2802bp) protein (934aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISP6_RHOCS
SCN18_14_9_16_R2_B_scaffold_165_24
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26079..26720
DNA (642bp) protein (214aa)
haloacid dehalogenase n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI0002F40F5B
haloacid dehalogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_25
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26717..27205)
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JQQ4_9PROT
single-strand DNA binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_26
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27321..28100)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI0002FBDB6F
Hydantoin racemase {ECO:0000313|EMBL:EQD53726.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_14_9_16_R2_B_scaffold_165_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28250..29488
DNA (1239bp) protein (413aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210B2_RHOPB
major facilitator transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_28
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29587..32502
DNA (2916bp) protein (972aa)
UvrABC system protein A n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISP0_RHOCS
uvrA; excinuclease ABC subunit A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_165_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32559..34229)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DRL6_BRAJP
Putative amidase {ECO:0000313|EMBL:AHY51839.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
amidase
Displaying items 1-30 of 129 in total

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