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SCN18_14_9_16_R2_B_scaffold_437

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_437_1
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39..1271)
DNA (1233bp) protein (411aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC4_NITHX
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CEJ09775.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extracellular ligand-binding receptor
SCN18_14_9_16_R2_B_scaffold_437_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1559..3082
DNA (1524bp) protein (508aa)
Hemolysin III n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GSV5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46258.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter substrate-binding protein
SCN18_14_9_16_R2_B_scaffold_437_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3113..4063
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D5H1_BRAJP
Binding protein-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AHY52296.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
peptide ABC transporter
SCN18_14_9_16_R2_B_scaffold_437_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4050..4922
DNA (873bp) protein (291aa)
Glutathione transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE34_9BRAD
Glutathione transport system permease {ECO:0000313|EMBL:ERF80649.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
binding-protein-dependent transport system inner membrane protein
SCN18_14_9_16_R2_B_scaffold_437_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4933..5925
DNA (993bp) protein (331aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCC3_9BRAD
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter ATPase subunit {ECO:0000313|EMBL:BAL78410.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_14_9_16_R2_B_scaffold_437_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5925..6902
DNA (978bp) protein (326aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C79AF
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46254.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
peptide ABC transporter ATP-binding protein
SCN18_14_9_16_R2_B_scaffold_437_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6899..7621)
DNA (723bp) protein (241aa)
Leucine/isoleucine/valine transporter subunit n=3 Tax=Ralstonia solanacearum RepID=V5A1I6_RALSL
livF; Branched-chain amino acid transport ATP-binding protein LivF
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:AGH87307.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
SCN18_14_9_16_R2_B_scaffold_437_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7618..8379)
DNA (762bp) protein (254aa)
ABC transporter related n=1 Tax=Burkholderia sp. H160 RepID=B5WAQ3_9BURK
ABC transporter related {ECO:0000313|EMBL:EEA04621.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
SCN18_14_9_16_R2_B_scaffold_437_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8376..9353)
DNA (978bp) protein (326aa)
transmembrane protein n=1 Tax=Ralstonia solanacearum RepID=UPI0001816CDC
Inner-membrane translocator {ECO:0000313|EMBL:KHK54858.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
livM; amino acid transport system permease lipoprotein
SCN18_14_9_16_R2_B_scaffold_437_10
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9350..10219)
DNA (870bp) protein (290aa)
inner-membrane translocator n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002FF3628
Inner-membrane translocator {ECO:0000313|EMBL:KHK54859.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
putative ABC-type branched-chain amino acid transport system, permease component. Phosphotransferase system, fructose-specific IIC domain
SCN18_14_9_16_R2_B_scaffold_437_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10291..11550)
DNA (1260bp) protein (420aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003627886
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHK54860.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
putative Leu/Ile/Val-binding periplasmic (PBP) ABC transporter protein
SCN18_14_9_16_R2_B_scaffold_437_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11653..12333)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000362AC31
Bradyrhizobium elkanii strain UASWS1015 Contig148, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53225.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
AraC family transcriptional regulator
SCN18_14_9_16_R2_B_scaffold_437_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12376..13098
DNA (723bp) protein (241aa)
Chromate transporter n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IB71_BEII9
Bradyrhizobium elkanii strain UASWS1015 Contig148, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53229.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
chromate transporter
SCN18_14_9_16_R2_B_scaffold_437_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13098..13628
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036F82E0
Bradyrhizobium elkanii strain UASWS1015 Contig148, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53224.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
chromate transporter
SCN18_14_9_16_R2_B_scaffold_437_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13778..15022
DNA (1245bp) protein (415aa)
Cytochrome c, class I n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IEK6_9SPHN
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:CCA90731.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_14_9_16_R2_B_scaffold_437_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15019..15501
DNA (483bp) protein (161aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AZ25_9RHIZ
(2Fe-2S)-binding protein {ECO:0000313|EMBL:EWY38364.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
SCN18_14_9_16_R2_B_scaffold_437_17
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15498..17705
DNA (2208bp) protein (736aa)
Isoquinoline 1-oxidoreductase beta subunit n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U1F7_9PROT
Isoquinoline 1-oxidoreductase beta subunit {ECO:0000313|EMBL:EMD81668.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
putative oxidoreductase subunit protein
SCN18_14_9_16_R2_B_scaffold_437_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17714..18445)
DNA (732bp) protein (244aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:BAC46495.1}; EC=1.1.1.100 {ECO:0000313|EMBL:BAC46495.1};; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89V28_BRADU
SCN18_14_9_16_R2_B_scaffold_437_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18517..19755
DNA (1239bp) protein (413aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJR6_9BRAD
monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_20
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19779..20288
DNA (510bp) protein (170aa)
gntK; gluconate kinase (EC:2.7.1.12)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00038137B2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20285..20785)
DNA (501bp) protein (167aa)
UPI0003CE6936 related cluster n=1 Tax=unknown RepID=UPI0003CE6936
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20880..21725)
DNA (846bp) protein (282aa)
Putative short-chain alcohol dehydrogenase-like protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBP4_RHOPA
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_14_9_16_R2_B_scaffold_437_23
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21750..22508)
DNA (759bp) protein (253aa)
mtnN; hypothetical protein (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00131282}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00064821};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00064819}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00131176}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Mta n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRJ1_RHOCS
SCN18_14_9_16_R2_B_scaffold_437_24
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22650..23366
DNA (717bp) protein (239aa)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q432_9RHOO
cysQ; 3'(2'),5'-bisphosphate nucleotidase
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:BAL25871.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCN18_14_9_16_R2_B_scaffold_437_25
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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23363..24340
DNA (978bp) protein (326aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Putative translation factor n=1 Tax=Oceanibaculum indicum P24 RepID=K2J2T1_9PROT
putative translation factor (Sua5-like)
SCN18_14_9_16_R2_B_scaffold_437_26
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24365..25837
DNA (1473bp) protein (491aa)
Bll6224 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GX1_BRADU
oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_27
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25834..27276
DNA (1443bp) protein (481aa)
D-2-hydroxyacid dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000368D219
putative oxidoreductase protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27281..27577)
DNA (297bp) protein (99aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_29
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27565..28431)
DNA (867bp) protein (289aa)
2,3-dimethylmalate lyase (EC:4.1.3.32)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QV96_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_14_9_16_R2_B_scaffold_437_30
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28540..29082)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFR7_9RHOB
Outer membrane protein A precursor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 63 in total

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