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SCN18_25_1_16_R1_B_scaffold_2466

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_2466_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..209
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D35BC0
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:CDM25944.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_2466_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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202..657
DNA (456bp) protein (152aa)
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Ribonuclease H n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I483_BORPD
SCN18_25_1_16_R1_B_scaffold_2466_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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701..1444
DNA (744bp) protein (248aa)
DNA polymerase III epsilon subunit (EC:2.7.7.7)
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CDM25942.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM25942.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
DNA polymerase III subunit epsilon n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSJ8_PUSST
SCN18_25_1_16_R1_B_scaffold_2466_trna_1
unknown

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1542..1613
DNA (72bp)
transferRNA Val
SCN18_25_1_16_R1_B_scaffold_2466_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1627..3180)
DNA (1554bp) protein (518aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Thauera sp. 63 RepID=N6XJA9_9RHOO
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:ENO79450.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
PAS/PAC sensor-containing diguanylate cyclase
SCN18_25_1_16_R1_B_scaffold_2466_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3327..4814
DNA (1488bp) protein (496aa)
Extracellular solute-binding protein family 5 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSS4_ALIDB
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO25086.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_1_16_R1_B_scaffold_2466_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5010..5366)
DNA (357bp) protein (119aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QPQ3_BORBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25938.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 7 items

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