ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1531

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1531_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..460)
DNA (459bp) protein (153aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003108F27
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1531_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

557..1408
DNA (852bp) protein (284aa)
Inositol-1-monophosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase {ECO:0000313|EMBL:CDM25764.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CDM25764.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E8B93D
SCN18_25_1_16_R1_B_scaffold_1531_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1463..2656
DNA (1194bp) protein (398aa)
N-acyl-L-amino acid amidohydrolase (EC:3.5.1.14)
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:CDM25765.1}; EC=3.5.1.14 {ECO:0000313|EMBL:CDM25765.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003053BB4
SCN18_25_1_16_R1_B_scaffold_1531_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2778..3170
DNA (393bp) protein (131aa)
Acyl-CoA hydrolase (EC:3.1.2.20)
Acyl-CoA hydrolase {ECO:0000313|EMBL:CDM25766.1}; EC=3.1.2.20 {ECO:0000313|EMBL:CDM25766.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Thioesterase family protein n=35 Tax=Bordetella RepID=V8U0G3_BORPT
SCN18_25_1_16_R1_B_scaffold_1531_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3184..4671
DNA (1488bp) protein (496aa)
Putative cation transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV3_PUSST
Mg/Co/Ni transporter MgtE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1531_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4912..5253)
DNA (342bp) protein (114aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
toxin n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003731403
growth inhibitor
SCN18_25_1_16_R1_B_scaffold_1531_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5250..5492)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003706884
growth regulator
Growth regulator {ECO:0000313|EMBL:BAO80176.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCN18_25_1_16_R1_B_scaffold_1531_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5992..6423
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AP23_BURRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW74355.1}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
SCN18_25_1_16_R1_B_scaffold_1531_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6478..6828
DNA (351bp) protein (117aa)
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_25_1_16_R1_B_scaffold_1531_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7220..8707)
DNA (1488bp) protein (496aa)
Protein translocase subunit SecA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV2_PUSST
Protein export cytoplasm protein SecA ATPase RNA helicase
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 10 items

View Taxonomy