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SCN18_25_1_16_R1_B_scaffold_1557_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(3..335)

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/L-proline transport ATP binding subunit n=35 Tax=Bordetella RepID=V8U6Z3_BORPT similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 111.0
  • Bit_score: 187
  • Evalue 4.80e-45
L-proline glycine betaine ABC transport system permease protein ProV similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 111.0
  • Bit_score: 216
  • Evalue 3.50e-54
L-proline glycine betaine ABC transport system permease protein ProV {ECO:0000313|EMBL:CDM23629.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 111.0
  • Bit_score: 216
  • Evalue 1.80e-53

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGAGCAAAATCGAAGTCCGCAACATCTACAAGATCTTCGGCCCGCACCCGGAACGCTGGCTGGCCGCCGCCCGCGAGGGCCTGTCCAAGGAAACCCTGCTGGAGCGCAGCGGCCACACCCTGGGCCTGCGCGACATCAGCCTGTCCATCGAGGAAGGCCACATCCACGTGATCATGGGCCTGTCGGGGTCCGGCAAATCGACGCTGATCCGGCACTTCAACCGCCTGATCGAGCCCAGCGCCGGGCAGATCCTGGTCGACGGGGTGGACGTGGTCAGCCTCAAGCCGCGCGAACTGGAACGCTTCCGCCAGAGCAAGATGAGCATGGTGTTC
PROTEIN sequence
Length: 111
MSKIEVRNIYKIFGPHPERWLAAAREGLSKETLLERSGHTLGLRDISLSIEEGHIHVIMGLSGSGKSTLIRHFNRLIEPSAGQILVDGVDVVSLKPRELERFRQSKMSMVF