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SCN18_25_1_16_R1_B_scaffold_1557

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1557_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
Glycine betaine/L-proline transport ATP binding subunit n=35 Tax=Bordetella RepID=V8U6Z3_BORPT
L-proline glycine betaine ABC transport system permease protein ProV
L-proline glycine betaine ABC transport system permease protein ProV {ECO:0000313|EMBL:CDM23629.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1557_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(337..1191)
DNA (855bp) protein (285aa)
Putative binding-protein-dependent transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWX0_PUSST
L-proline glycine betaine ABC transport system permease protein ProW
L-proline glycine betaine ABC transport system permease protein ProW {ECO:0000313|EMBL:CDM23628.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1557_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1202..2257)
DNA (1056bp) protein (352aa)
Putative glycine betaine/choline/proline transport system substrate-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWX1_PUSST
L-proline glycine betaine binding ABC transporter protein ProX
L-proline glycine betaine binding ABC transporter protein ProX {ECO:0000313|EMBL:CDM23627.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1557_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2605..3816)
DNA (1212bp) protein (404aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDM23626.1}; EC=2.1.1.79 {ECO:0000313|EMBL:CDM23626.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Cyclopropane-fatty-acyl-phospholipid synthase n=2 Tax=Alcaligenes RepID=M5J0R0_9BURK
SCN18_25_1_16_R1_B_scaffold_1557_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3956..5161
DNA (1206bp) protein (402aa)
Putative transmembrane transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXD0_PUSST
Multidrug resistance transporter, Bcr/CflA family
Multidrug resistance transporter, Bcr/CflA family {ECO:0000313|EMBL:CDM23625.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1557_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5226..5462
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=2 Tax=Achromobacter RepID=F7SV59_ALCXX
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
LSU ribosomal protein L28p
SCN18_25_1_16_R1_B_scaffold_1557_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5486..5653
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=19 Tax=Alcaligenaceae RepID=RL33_BORA1
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
SCN18_25_1_16_R1_B_scaffold_1557_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5796..8447
DNA (2652bp) protein (884aa)
Leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:CDM23622.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Leucine--tRNA ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXD4_PUSST
SCN18_25_1_16_R1_B_scaffold_1557_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8444..8542
DNA (99bp) protein (33aa)
LPS-assembly lipoprotein RlpB precursor
Displaying 9 items

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