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SCN18_10_11_15_R4_P_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_198_1
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(1..3855)
DNA (3855bp) protein (1285aa)
RHS repeat-associated core domain protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N1K7_RHILT
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EJB01774.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
Rhs repeat-associated core/peptidase C39-like domain-containing protein
SCN18_10_11_15_R4_P_scaffold_198_2
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

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comp(3875..4147)
DNA (273bp) protein (91aa)
RHS repeat protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GW58_RHILT
YD repeat-containing protein
YD repeat-containing protein {ECO:0000313|EMBL:AJC83315.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCN18_10_11_15_R4_P_scaffold_198_3
CN-SCN_Rhodanobacter_45x, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4147..5103)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UN26_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC83313.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCN18_10_11_15_R4_P_scaffold_198_4
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5115..6071)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035FD3B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC83313.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCN18_10_11_15_R4_P_scaffold_198_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6093..7058)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UN26_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC83313.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCN18_10_11_15_R4_P_scaffold_198_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7645..8871
DNA (1227bp) protein (409aa)
Fumarate reductase/succinate dehydrogenase flavoprotein,N-terminal:HI0933-like protein:FAD dependent n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TTK3_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC21040.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
SCN18_10_11_15_R4_P_scaffold_198_7
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8960..10252
DNA (1293bp) protein (431aa)
Acetylornithine deacetylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IDL8_9PROT
acetylornithine deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10416..11273)
DNA (858bp) protein (286aa)
Permeases n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HT34_AZOC5
permeases
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_9
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11400..12527)
DNA (1128bp) protein (376aa)
TPR domain-containing protein n=3 Tax=Burkholderia glumae RepID=C5ACK8_BURGB
glycosyltransferase 9 family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12688..12891)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8P7_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13029..13949
DNA (921bp) protein (307aa)
Putative Transcriptional Regulator, LysR family Glycine cleavage system transcriptional activator (Gcv operon activator) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TX32_9BRAD
transcriptional Regulator, LysR family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_12
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13960..14394
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4Z0_9PROT
Transcriptional regulator, MarR family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..15174
DNA (768bp) protein (256aa)
Short-chain alcohol dehydrogenase like protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YQS0_9BRAD
Short-chain alcohol dehydrogenase like protein {ECO:0000313|EMBL:EHR05176.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
dehydrogenase
SCN18_10_11_15_R4_P_scaffold_198_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15201..16385
DNA (1185bp) protein (395aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTN2_PARL1
luciferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16572..17627
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000348041E
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_16
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17744..18520
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RFC4_9RHOO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_17
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18619..19242
DNA (624bp) protein (208aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN binding protein n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NTI5_9GAMM
phosphohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_18
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19362..20033)
DNA (672bp) protein (224aa)
Aspartate racemase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFW5_9BRAD
aspartate racemase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_19
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20040..21038)
DNA (999bp) protein (333aa)
Fatty acid desaturase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP35_NITHX
fatty acid desaturase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_20
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21161..21925)
DNA (765bp) protein (255aa)
UPI0003CFF336 related cluster n=1 Tax=unknown RepID=UPI0003CFF336
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21947..22879)
DNA (933bp) protein (311aa)
Putative permease component of ABC transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP18_9PROT
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22876..23889)
DNA (1014bp) protein (338aa)
Putative spermidine/putrescine-binding periplasmic abc transporter protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP19_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23909..24961)
DNA (1053bp) protein (351aa)
ABC opine/polyamine transporter, ATPase subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP20_9PROT
spermidine/putrescine ABC transporter ATPase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24978..25799)
DNA (822bp) protein (274aa)
ABC polyamine/opine/phosphonate uptake family transporter, inner membrane subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP22_9PROT
binding-protein-dependent transporters inner membrane component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_25
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25909..27141)
DNA (1233bp) protein (411aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP25_9PROT
peptidase M38
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27275..28516)
DNA (1242bp) protein (414aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP25_9PROT
amidohydrolase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_27
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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28583..29104
DNA (522bp) protein (174aa)
Adenylate kinase-like kinase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLD2_9CYAN
adenylate kinase-like kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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29200..30201
DNA (1002bp) protein (334aa)
Hydroxyproline-2-epimerase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5C8_9PROT
hydroxyproline-2-epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_198_29
unknown

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30211..30825
DNA (615bp) protein (205aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_198_30
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31238..32443)
DNA (1206bp) protein (402aa)
redicted acyl-CoA transferases/carnitine dehydratase (EC:2.8.3.16)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0K9_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 80 in total

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