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SCN18_10_11_15_R4_P_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_146_1
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

comp(3..1430)
DNA (1428bp) protein (476aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ25091.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor
SCN18_10_11_15_R4_P_scaffold_146_2
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

comp(1476..2828)
DNA (1353bp) protein (451aa)
Redoxin domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBL9_9SPHI
Redoxin domain protein {ECO:0000313|EMBL:CDS92098.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_146_3
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3259..3504
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000376AB3A
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC89843.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_146_4
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3856..4980)
DNA (1125bp) protein (375aa)
Filamentation induced by cAMP protein Fic id=3541816 bin=GWF2_Bacteroidetes_41_31 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
filamentation induced by cAMP protein Fic
Tax=BJP_IG2103_Bacteroidetes_40_10
SCN18_10_11_15_R4_P_scaffold_146_5
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5317..6696)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRX1_NIAKG
tRNA modification GTPase trmE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_6
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6751..7584)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037202C1
TonB family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_7
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7727..8560)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037202C1
TonB family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_8
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8586..9137)
DNA (552bp) protein (184aa)
Outer membrane transport energization protein ExbD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW6_NIAKG
outer membrane transport energization protein ExbD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_9
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9180..9830)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E2E4
outer membrane transport energization protein ExbD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_10
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9917..10786)
DNA (870bp) protein (290aa)
flagellar motor protein MotA n=1 Tax=Segetibacter koreensis RepID=UPI00037A2E3C
outer membrane transport energization protein ExbB
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_11
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11064..13598
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376FC93
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_12
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13806..14534
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370C800
Oxidoreductase {ECO:0000313|EMBL:KIC96151.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ferredoxin--NAD(+) reductase
SCN18_10_11_15_R4_P_scaffold_146_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(14635..16098)
DNA (1464bp) protein (488aa)
glycyl-tRNA synthetease n=1 Tax=Segetibacter koreensis RepID=UPI0003661282
glycyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16126..16452)
DNA (327bp) protein (109aa)
Pyrophosphatase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C4Q9_9BACT
Pyrophosphatase {ECO:0000313|EMBL:KIC96200.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
pyrophosphatase
SCN18_10_11_15_R4_P_scaffold_146_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16601..17053)
DNA (453bp) protein (151aa)
D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=Myroides odoratimimus RepID=H1GHI7_9FLAO
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCN18_10_11_15_R4_P_scaffold_146_16
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17088..17495
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003713AA1
class I peptide chain release factor
Peptide chain release factor 1 {ECO:0000313|EMBL:KIC94907.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCN18_10_11_15_R4_P_scaffold_146_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17495..18229
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBZ4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99287.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_146_18
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18229..19302
DNA (1074bp) protein (358aa)
Cytochrome-c peroxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBZ3_NIAKG
cytochrome-c peroxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_19
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19445..20950
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036885AE
Uncharacterized protein {ECO:0000313|EMBL:KHD90123.1}; Flags: Fragment;; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;"
polysaccharide biosynthesis protein
SCN18_10_11_15_R4_P_scaffold_146_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21091..21561
DNA (471bp) protein (157aa)
Putative GAF sensor protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCM4_NIAKG
Diguanylate cyclase {ECO:0000313|EMBL:KIC93179.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative GAF sensor protein
SCN18_10_11_15_R4_P_scaffold_146_21
unknown

Not on your lists

comp(21581..21694)
DNA (114bp) protein (38aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_146_22
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

21726..22991
DNA (1266bp) protein (422aa)
DEAD/DEAH box helicase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037667AB
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EHQ28362.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
DEAD/DEAH box helicase
SCN18_10_11_15_R4_P_scaffold_146_23
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23032..23382
DNA (351bp) protein (117aa)
beta-lactamase n=1 Tax=Spirosoma luteum RepID=UPI0003672039
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_146_24
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23361..23672
DNA (312bp) protein (104aa)
Beta-lactamase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K9W1_9BACT
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:CCH00914.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCN18_10_11_15_R4_P_scaffold_146_trna_1
unknown

Not on your lists

23724..23805
DNA (82bp)
transferRNA Leu
SCN18_10_11_15_R4_P_scaffold_146_25
SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23870..24820)
DNA (951bp) protein (317aa)
HipA protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8A4_9FLAO
Phosphatidylinositol kinase {ECO:0000313|EMBL:KGO95655.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
HipA domain-containing protein
SCN18_10_11_15_R4_P_scaffold_146_26
SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24813..25145)
DNA (333bp) protein (111aa)
phosphatidylinositol kinase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F23024
Phosphatidylinositol kinase {ECO:0000313|EMBL:KGO95656.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_146_27
SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25142..25426)
DNA (285bp) protein (95aa)
Putative transcriptional regulator, XRE family n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSU3_9FLAO
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:EIA08652.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
lambda repressor-like DNA-binding protein
SCN18_10_11_15_R4_P_scaffold_146_28
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25588..27015
DNA (1428bp) protein (476aa)
Sulfatase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV35_PEDHD
sulfatase
Sulfatase {ECO:0000313|EMBL:ACU06043.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCN18_10_11_15_R4_P_scaffold_146_29
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27042..28535
DNA (1494bp) protein (498aa)
Cerebroside-sulfatase {ECO:0000313|EMBL:AEW00056.1}; EC=3.1.6.8 {ECO:0000313|EMBL:AEW00056.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cerebroside-sulfatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRD4_NIAKG
Cerebroside-sulfatase
Displaying items 1-30 of 120 in total

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