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SCN18_10_11_15_R4_P_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_391_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(457..555)
DNA (99bp) protein (33aa)
Transposase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUB1_SOLCM
transposase
Transposase {ECO:0000313|EMBL:AFD07223.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_10_11_15_R4_P_scaffold_391_2
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(759..1484)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AF4D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02430.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCN18_10_11_15_R4_P_scaffold_391_3
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1489..4269)
DNA (2781bp) protein (927aa)
TonB-dependent receptor n=1 Tax=Flavobacterium sp. F52 RepID=J0RLW5_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:EJG00017.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_391_4
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4295..4678)
DNA (384bp) protein (128aa)
Uncharacterized protein n=4 Tax=Myroides odoratimimus RepID=H1GGW4_9FLAO
Protein of unknown function DUF1573
Uncharacterized protein {ECO:0000313|EMBL:EHO12040.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
SCN18_10_11_15_R4_P_scaffold_391_5
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4684..5871)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZU3_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25757.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
SCN18_10_11_15_R4_P_scaffold_391_6
unknown

Not on your lists

comp(5956..6168)
DNA (213bp) protein (71aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_391_7
unknown

Not on your lists

comp(6388..6546)
DNA (159bp) protein (53aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_391_8
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7444..7965
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000374159F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU70606.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
SCN18_10_11_15_R4_P_scaffold_391_9
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7976..8149
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E802E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU70605.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
SCN18_10_11_15_R4_P_scaffold_391_10
unknown

Not on your lists

8184..8552
DNA (369bp) protein (123aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_391_11
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8576..8779)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000375993C
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCN18_10_11_15_R4_P_scaffold_391_12
unknown

Not on your lists

9064..9288
DNA (225bp) protein (75aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_391_13
Candidatus Amoebophilus asiaticus_SCNPILOT_CONT_500_P_Amoebophilus_asiaticus_42_9.0, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9270..9647
DNA (378bp) protein (126aa)
twitching motility protein PilT n=1 Tax=Cytophagales str. B6 RepID=UPI0003B64D46
Twitching motility protein PilT {ECO:0000313|EMBL:KIA91413.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
Nucleotide binding protein , containing PIN domain
SCN18_10_11_15_R4_P_scaffold_391_14
unknown

Not on your lists

comp(10212..11075)
DNA (864bp) protein (288aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_391_15
unknown

Not on your lists

comp(11145..11711)
DNA (567bp) protein (189aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_391_16
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11708..12982)
DNA (1275bp) protein (425aa)
SCN18_10_11_15_R4_P_scaffold_391_17
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13102..13731)
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEC4_CHIPD
LuxR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_391_18
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13718..15616)
DNA (1899bp) protein (633aa)
degS_2; Signal transduction histidine-protein kinase/phosphatase DegS (EC:2.7.13.3)
Signal transduction histidine-protein kinase/phosphatase DegS {ECO:0000313|EMBL:AJW62153.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AJW62153.1};; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
Signal transduction histidine kinase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CNR4_ELIME
SCN18_10_11_15_R4_P_scaffold_391_19
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16099..17751)
DNA (1653bp) protein (551aa)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGJ0_CHIPD
glycoside hydrolase
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:ACU61695.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_10_11_15_R4_P_scaffold_391_20
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17860..18876)
DNA (1017bp) protein (339aa)
alcohol dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036A3E9B
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACU04940.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCN18_10_11_15_R4_P_scaffold_391_21
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19014..19922
DNA (909bp) protein (303aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Flavobacterium sp. CF136 RepID=J3C5J5_9FLAO
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL64731.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
regulatory helix-turn-helix protein
SCN18_10_11_15_R4_P_scaffold_391_22
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19975..20568
DNA (594bp) protein (198aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFF7_NIAKG
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:AEV98388.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_391_23
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20687..21136
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AQI2_MARSH
Uncharacterized protein {ECO:0000313|EMBL:AKA33887.1}; Flags: Precursor;; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_391_24
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21198..22112
DNA (915bp) protein (305aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQR6_SPILD
xylose isomerase
Tax=GWA2_Ignavibacteria_54_16_curated
SCN18_10_11_15_R4_P_scaffold_391_25
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22119..23966)
DNA (1848bp) protein (616aa)
amidophosphoribosyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI000365BB91
Amidophosphoribosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_391_26
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24021..24584)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DA0BB
NADPH-dependent FMN reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_391_27
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

comp(24596..25123)
DNA (528bp) protein (176aa)
YceI family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECK1_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_391_28
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25160..25882)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B2493
pirin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_391_29
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

comp(25936..26349)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367F190
transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_391_30
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26492..27898)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003788883
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 43 in total

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