ggKbase home page

SCN18_10_11_15_R4_P_scaffold_523_14

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9917..10255)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU82_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 112.0
  • Bit_score: 187
  • Evalue 6.30e-45
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 204
  • Evalue 7.00e-50
50S ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 112.0
  • Bit_score: 187
  • Evalue 1.80e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Niastella_39_19 → SCNpilot_P_inoc_Niastella_39_19 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 339
ATGAGTACAAGATTTAAACCCAAATTCAACATCAAGAAAGGTGATACCGTAGTGGTGATTACCGGCGATGACAAGGACTTGAAAAAGCCCCGCAAGGTGTTGGAAGTGATCGTAGACAAAGGCCGTGTAGTAGTGGAAGGCGTGAATATCGTAACCAAACATACCAAGCCTTCTGCTCAGAACACAAAGGGTGGTATTGTAAAAGTAGAGGCCCCCATCAACATCAGTAATGTGATGGTGTGGGATGCAAAATCTGGCGCCGCTACCAAAGTAAAACGTACCAGGGAGAATGGTAAATTAGTTCGTATATCTAAAAAATCAGGGGAGGTAATCAAGTAA
PROTEIN sequence
Length: 113
MSTRFKPKFNIKKGDTVVVITGDDKDLKKPRKVLEVIVDKGRVVVEGVNIVTKHTKPSAQNTKGGIVKVEAPINISNVMVWDAKSGAATKVKRTRENGKLVRISKKSGEVIK*