name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R3_B_scaffold_1290_1
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2..457)
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F0F1 ATP synthase subunit A n=1 Tax=Afipia birgiae RepID=UPI0002F0D8B8
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
atpB; ATP synthase subunit a
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SCN18_30_10_14_R3_B_scaffold_1290_2
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1302..1817
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3N7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34270.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
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SCN18_30_10_14_R3_B_scaffold_1290_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1914..3575)
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major facilitator transporter n=1 Tax=Afipia birgiae RepID=UPI00037B42B6
Uncharacterized protein {ECO:0000313|EMBL:EKS34269.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
MFS family sugar transporter
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SCN18_30_10_14_R3_B_scaffold_1290_4
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3877..4548
|
Putative glycerol metabolism activator AgmR n=2 Tax=Oligotropha carboxidovorans RepID=B6JDD3_OLICO
LuxR family two component transcriptional regulator
Putative glycerol metabolism activator AgmR {ECO:0000313|EMBL:AEI07923.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
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SCN18_30_10_14_R3_B_scaffold_1290_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4593..8111)
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Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NN13_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29774.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
two-component hybrid sensor and regulator
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SCN18_30_10_14_R3_B_scaffold_1290_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8300..8950
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU94_AFIFE
Transcriptional regulatory protein FixJ {ECO:0000313|EMBL:CEG09523.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
LuxR family transcriptional regulator
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SCN18_30_10_14_R3_B_scaffold_1290_7
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8975..10246)
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hemA; 5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase HemA {ECO:0000313|EMBL:AEI07920.1}; EC=2.3.1.37 {ECO:0000313|EMBL:AEI07920.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
5-aminolevulinate synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JDD6_OLICO
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SCN18_30_10_14_R3_B_scaffold_1290_8
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10375..11391)
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Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V716_9BRAD
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SCN18_30_10_14_R3_B_scaffold_1290_trna_2
unknown
|
Not on your lists |
comp(11425..11496)
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transferRNA Thr
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SCN18_30_10_14_R3_B_scaffold_1290_9
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11783..11977
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V735_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51045.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
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SCN18_30_10_14_R3_B_scaffold_1290_10
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12114..13403
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7A9_9BRAD
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SCN18_30_10_14_R3_B_scaffold_1290_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13464..13916
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V738_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09498.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
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SCN18_30_10_14_R3_B_scaffold_1290_12
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14032..15327
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Histidinol dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V739_9BRAD
hisD; histidinol dehydrogenase
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SCN18_30_10_14_R3_B_scaffold_1290_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
15324..15818
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UPF0262 protein RPA4530 n=2 Tax=Rhodopseudomonas palustris RepID=Y4530_RHOPA
hypothetical protein
UPF0262 protein Rpal_5021 {ECO:0000255|HAMAP-Rule:MF_00678}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
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SCN18_30_10_14_R3_B_scaffold_1290_14
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
15902..16366
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMP9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29689.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
protein-tyrosine-phosphatase
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SCN18_30_10_14_R3_B_scaffold_1290_15
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16453..17076
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Maf-like protein HMPREF9695_04158 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7A4_9BRAD
Maf-like protein HMPREF9695_04158 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
maf; Maf-like protein
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SCN18_30_10_14_R3_B_scaffold_1290_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
17178..17372
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hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DCC088
zinc-binding protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
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SCN18_30_10_14_R3_B_scaffold_1290_trna_1
unknown
|
Not on your lists |
17511..17583
|
transferRNA Phe
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SCN18_30_10_14_R3_B_scaffold_1290_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(17522..18676)
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Phage integrase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRC6_NITHX
phage integrase
Phage integrase {ECO:0000313|EMBL:ABE61221.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_30_10_14_R3_B_scaffold_1290_18
CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, Eukaryote
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Not on your lists |
comp(18731..18973)
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Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRC5_NITHX
Uncharacterized protein {ECO:0000313|EMBL:CEG09492.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
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SCN18_30_10_14_R3_B_scaffold_1290_19
unknown
|
Not on your lists |
comp(19088..19333)
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This feature has no annotations |
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SCN18_30_10_14_R3_B_scaffold_1290_20
unknown
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Not on your lists |
comp(19330..19584)
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This feature has no annotations |
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SCN18_30_10_14_R3_B_scaffold_1290_21
unknown
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Not on your lists |
comp(19577..19897)
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This feature has no annotations |
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SCN18_30_10_14_R3_B_scaffold_1290_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20259..21317)
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Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XRE5_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:EAQ47878.1}; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.;" source="Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217); (Flavobacterium sp. (strain MED217)).;"
hypothetical protein
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