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SCN18_30_10_14_R3_B_scaffold_936

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R3_B_scaffold_936_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72..671
DNA (600bp) protein (200aa)
Fe-S metabolism associated SufE n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5D2_9BRAD
Fe-S metabolism associated SufE {ECO:0000313|EMBL:EFI51529.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative SufE-like protein
SCN18_30_10_14_R3_B_scaffold_936_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(985..1626)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJY5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:CEG08505.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1623..2129)
DNA (507bp) protein (169aa)
ATPase involved in DNA replication initiation n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WX99_9BRAD
chromosomal replication initiator, DnaA-like
ATPase involved in DNA replication initiation {ECO:0000313|EMBL:EAQ35391.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCN18_30_10_14_R3_B_scaffold_936_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2256..2672)
DNA (417bp) protein (139aa)
Transcriptional regulator n=2 Tax=Bradyrhizobiaceae RepID=F7QL93_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EGP07746.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
MucR family transcriptional regulator
SCN18_30_10_14_R3_B_scaffold_936_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2905..3912)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL92_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07745.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_6
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4296..5951
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EBE901
Uncharacterized protein {ECO:0000313|EMBL:EKS42002.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6083..7495)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PJI6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42767.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7560..9167)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK35_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63412.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R3_B_scaffold_936_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9628..10035
DNA (408bp) protein (136aa)
Ferredoxin n=2 Tax=Oligotropha carboxidovorans RepID=B6JG20_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06140.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_936_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10109..10966
DNA (858bp) protein (286aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMG7_9BRAD
SCN18_30_10_14_R3_B_scaffold_936_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10963..11328
DNA (366bp) protein (122aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUE8_9BRAD
Dihydroneopterin aldolase {ECO:0000313|EMBL:EKS41993.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCN18_30_10_14_R3_B_scaffold_936_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11335..11826
DNA (492bp) protein (164aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH61_9BRAD
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EKS41992.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCN18_30_10_14_R3_B_scaffold_936_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11826..12479
DNA (654bp) protein (218aa)
Pyroglutamyl-peptidase I {ECO:0000256|SAAS:SAAS00130640}; EC=3.4.19.3 {ECO:0000256|SAAS:SAAS00130640};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E77A31
SCN18_30_10_14_R3_B_scaffold_936_14
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12567..13934
DNA (1368bp) protein (456aa)
Nitrous oxidase accessory protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQE4_NITWN
Nitrous oxidase accessory protein {ECO:0000313|EMBL:KGT78838.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
nitrous oxidase accessory protein
SCN18_30_10_14_R3_B_scaffold_936_15
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13890..14219)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL74_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07727.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_16
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14340..15803)
DNA (1464bp) protein (488aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5B4_9BRAD
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EFI51511.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
conserved exported hypothetical protein, putative subtilisin-like serine protease
SCN18_30_10_14_R3_B_scaffold_936_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15852..16544)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH52_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41982.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_18
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16541..17110)
DNA (570bp) protein (190aa)
RNA polymerase sigma factor n=1 Tax=Afipia birgiae RepID=UPI000307BCF9
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC49410.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
RNA polymerase sigma factor
SCN18_30_10_14_R3_B_scaffold_936_19
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17490..18629
DNA (1140bp) protein (380aa)
Diguanylate cyclase n=2 Tax=Oligotropha carboxidovorans RepID=B6JG49_OLICO
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:AEI06133.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R3_B_scaffold_936_20
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18694..19803
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D6E0ED
Uncharacterized protein {ECO:0000313|EMBL:EKS42746.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_21
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19816..20454)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI82_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28751.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_22
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20451..21002)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Afipia birgiae RepID=UPI0003185354
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS41977.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
RNA polymerase sigma factor
SCN18_30_10_14_R3_B_scaffold_936_23
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21216..21890
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRE1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28753.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_24
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21970..22749
DNA (780bp) protein (260aa)
Enoyl CoA hydratase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2W9_BRAJP
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EJZ31853.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
enoyl CoA hydratase
SCN18_30_10_14_R3_B_scaffold_936_25
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22736..24607)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PME7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41974.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_30_10_14_R3_B_scaffold_936_26
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24836..26239
DNA (1404bp) protein (468aa)
TolC family type I secretion outer membrane protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUC9_9BRAD
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EKS41973.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
type I secretion outer membrane protein, TolC
SCN18_30_10_14_R3_B_scaffold_936_27
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26257..29382)
DNA (3126bp) protein (1042aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL59_9BRAD
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EGP07712.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
cation/heavy metal efflux system protein
SCN18_30_10_14_R3_B_scaffold_936_28
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29416..30327)
DNA (912bp) protein (304aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK73_9BRAD
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS41971.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
HlyD family heavy metal efflux protein
Displaying 28 items

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