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SCN18_26_2_15_R1_B_scaffold_3193

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_3193_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..544)
DNA (543bp) protein (181aa)
UPI0003CE88D1 related cluster n=1 Tax=unknown RepID=UPI0003CE88D1
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:ESW79984.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
D-alanyl-D-alanine carboxypeptidase
SCN18_26_2_15_R1_B_scaffold_3193_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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750..1886
DNA (1137bp) protein (379aa)
amidohydrolase (EC:3.5.1.32)
PREDICTED: IAA-amino acid hydrolase ILR1-like 3-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C117C0
Amidohydrolase {ECO:0000313|EMBL:ESY14607.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
SCN18_26_2_15_R1_B_scaffold_3193_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2168..4021
DNA (1854bp) protein (618aa)
Acyltransferase 3 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUH8_PARL1
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABS63561.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_26_2_15_R1_B_scaffold_3193_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4476..5198
DNA (723bp) protein (241aa)
Regulatory protein Crp n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TP23_MESCW
Putative transcriptional activator {ECO:0000313|EMBL:CDX27457.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
regulatory protein crp
SCN18_26_2_15_R1_B_scaffold_3193_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5221..5352)
DNA (132bp) protein (44aa)
Cyd operon protein YbgT n=5 Tax=Methylobacterium extorquens RepID=A9W2F7_METEP
cyd operon protein YbgT
Cyd operon protein YbgT {ECO:0000313|EMBL:ABY29763.1}; Flags: Precursor;; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
SCN18_26_2_15_R1_B_scaffold_3193_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5374..6525)
DNA (1152bp) protein (384aa)
Cytochrome d terminal oxidase, subunit II {ECO:0000313|EMBL:CDX44565.1}; EC=1.9.3.- {ECO:0000313|EMBL:CDX44565.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cydB; cytochrome d terminal oxidase, polypeptide subunit II (EC:1.9.3.-)
Cytochrome d oxidase subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TW40_9RHIZ
SCN18_26_2_15_R1_B_scaffold_3193_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6549..8123)
DNA (1575bp) protein (525aa)
Cytochrome d terminal oxidase, subunit I {ECO:0000313|EMBL:CDX55174.1}; EC=1.9.3.- {ECO:0000313|EMBL:CDX55174.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Rhizobium freirei PRF 81 RepID=N6USJ1_9RHIZ
cytochrome bd ubiquinol oxidase subunit I
SCN18_26_2_15_R1_B_scaffold_3193_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8224..9825
DNA (1602bp) protein (534aa)
ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV82_9RHIZ
Putative ABC transporter related, fused ATPase and permease domains (CydD-like) {ECO:0000313|EMBL:CDX27421.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ABC transporter related, fused ATPase and permease domains (CydD-like)
SCN18_26_2_15_R1_B_scaffold_3193_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9825..11465
DNA (1641bp) protein (547aa)
Transport ATP-binding protein CydC n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0L1_9RHIZ
ABC transporter related {ECO:0000313|EMBL:CDX28069.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter-like protein
Displaying 9 items

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