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SCN18_30_10_14_R2_B_scaffold_4409

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4409_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..91)
DNA (90bp) protein (30aa)
SCN18_30_10_14_R2_B_scaffold_4409_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(132..1067)
DNA (936bp) protein (312aa)
NB-ARC domain-containing protein,TIR-like domain-containing protein (DUF1863) n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LST0_9CHRO
NB-ARC domain-containing protein,TIR-like domain-containing protein (DUF1863) {ECO:0000313|EMBL:ELR99180.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
pterin-4a-carbinolamine dehydratase
SCN18_30_10_14_R2_B_scaffold_4409_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1290..1973
DNA (684bp) protein (228aa)
pcxB; protocatechuate 3,4-dioxygenase subunit beta (EC:1.13.11.3)
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:EGF28370.1}; EC=1.13.11.- {ECO:0000313|EMBL:EGF28370.1};; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
Intradiol ring-cleavage dioxygenase n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CLI2_RHOBT
SCN18_30_10_14_R2_B_scaffold_4409_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2035..2904
DNA (870bp) protein (290aa)
Putative secreted protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NA26_9ACTO
Putative secreted protein {ECO:0000313|EMBL:EGG49870.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4409_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3033..4733
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0GLE4_9BRAS
Uncharacterized protein {ECO:0000313|EMBL:EOA36581.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.;" source="Capsella rubella.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4409_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4804..5991)
DNA (1188bp) protein (396aa)
methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4550
SAM-dependent methyltransferase
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCN18_30_10_14_R2_B_scaffold_4409_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6118..6546)
DNA (429bp) protein (143aa)
chemotaxis protein CheY n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C454F
response regulator containing a CheY-like receiver domain and a GGDEF domain
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:AGA25774.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4409_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6749..7756
DNA (1008bp) protein (336aa)
Histone deacetylase superfamily protein n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C454E
Acetylpolyamine aminohydrolase {ECO:0000313|EMBL:EIL96817.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aphA; acetylpolyamine aminohydrolase AphA
Displaying 8 items

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