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SCN18_30_10_14_R2_B_scaffold_4745

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4745_1
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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2..421
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D33
Integral membrane protein {ECO:0000313|EMBL:EDX24698.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4745_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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564..1298
DNA (735bp) protein (245aa)
hypothetical cytosolic protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D32
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV64218.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_4745_3
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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1298..2068
DNA (771bp) protein (257aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
purine nucleoside phosphorylase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D31
purine nucleoside phosphorylase I
SCN18_30_10_14_R2_B_scaffold_4745_4
unknown

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comp(2324..2581)
DNA (258bp) protein (86aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4745_5
unknown

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2829..3053
DNA (225bp) protein (75aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4745_6
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3058..3567)
DNA (510bp) protein (170aa)
Methyltransferase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHX1_SINAD
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AGA28445.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4745_7
unknown

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comp(3630..3863)
DNA (234bp) protein (78aa)
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4745_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4088..4681)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F3D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG74353.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
SCN18_30_10_14_R2_B_scaffold_4745_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4844..5683
DNA (840bp) protein (280aa)
short-chain dehydrogenase/reductase SDR n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F3C
short-chain dehydrogenase
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_4745_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5897..6340
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C050_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL62073.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Dual specificity protein phosphatase
SCN18_30_10_14_R2_B_scaffold_4745_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6340..8355
DNA (2016bp) protein (672aa)
Asparagine synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F3A
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
asparagine synthase
SCN18_30_10_14_R2_B_scaffold_4745_12
SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8398..9540
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CA6
antimicrobial peptide ABC transporter permease
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGA26419.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4745_13
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9606..10334
DNA (729bp) protein (243aa)
ABC transporter ATP-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CA5
antimicrobial peptide ABC transporter ATPase
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGA26420.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4745_14
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10373..11512
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CA4
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGA26421.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_4745_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11509..12420
DNA (912bp) protein (304aa)
Phytoene/squalene synthetase (EC:2.5.1.32)
Squalene/phytoene synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CA3
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_4745_16
unknown

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comp(12546..12845)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying 16 items

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