ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2260

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2260_1
unknown

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3537
SCN18_30_10_14_R2_B_scaffold_2260_2
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176..1804
DNA (1629bp) protein (543aa)
TPR repeat n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3E45
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57902.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_30_10_14_R2_B_scaffold_2260_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1814..3817)
DNA (2004bp) protein (668aa)
Serine/threonine protein kinase domain protein {ECO:0000313|EMBL:EMI41862.1}; EC=2.7.-.- {ECO:0000313|EMBL:EMI41862.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
Serine/threonine protein kinase domain protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5SXZ5_9PLAN
serine/threonine protein kinase
SCN18_30_10_14_R2_B_scaffold_2260_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3943..6003)
DNA (2061bp) protein (687aa)
Protein kinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C865_MYXFH
protein kinase
Protein kinase {ECO:0000313|EMBL:AEI68192.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_30_10_14_R2_B_scaffold_2260_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6161..7633
DNA (1473bp) protein (491aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
6-phosphogluconate dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C404F
6-phosphogluconate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_2260_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7780..8403)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56E6
Uncharacterized protein {ECO:0000313|EMBL:EDL61591.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2260_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8512..10407
DNA (1896bp) protein (632aa)
thiamine pyrophosphate enzyme-like TPP binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A32
thiamine pyrophosphate central domain-containing protein
Thiamine pyrophosphate central domain-containing protein {ECO:0000313|EMBL:ADV63166.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2260_8
unknown

Not on your lists

comp(10428..10700)
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2260_9
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11458..12279)
DNA (822bp) protein (274aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SG03_GEOOG
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB76871.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCN18_30_10_14_R2_B_scaffold_2260_10
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12276..13061)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QUQ3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX60393.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2260_11
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13075..13866)
DNA (792bp) protein (264aa)
Glycosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QGE7_9DELT
Glycosyltransferase {ECO:0000313|EMBL:EPX60394.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
glycosyl transferase family 2
SCN18_30_10_14_R2_B_scaffold_2260_12
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13930..14946)
DNA (1017bp) protein (339aa)
Glycosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P7G5_9DELT
Glycosyltransferase {ECO:0000313|EMBL:EPX60395.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
family 2 glycosyl transferase
SCN18_30_10_14_R2_B_scaffold_2260_13
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14943..16136)
DNA (1194bp) protein (398aa)
D amino acid oxidase (DAO) family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PB93_9DELT
D amino acid oxidase (DAO) family {ECO:0000313|EMBL:EPX60396.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
FAD dependent oxidoreductase
SCN18_30_10_14_R2_B_scaffold_2260_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16241..17068)
DNA (828bp) protein (276aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C409F
SCN18_30_10_14_R2_B_scaffold_2260_15
unknown

Not on your lists

17180..17548
DNA (369bp) protein (123aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2260_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17579..18265
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D434_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19014.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCN18_30_10_14_R2_B_scaffold_2260_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18299..18631)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F4B
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:EKK03859.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
Displaying 17 items

View Taxonomy