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SCN18_30_10_14_R2_B_scaffold_2400

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2400_1
unknown

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2400_2
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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235..969
DNA (735bp) protein (245aa)
demethylmenaquinone methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4041
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:BAL57179.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
demethylmenaquinone methyltransferase-like protein
SCN18_30_10_14_R2_B_scaffold_2400_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1578..2906)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28768.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2400_trna_1
unknown

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3101..3172
DNA (72bp)
transferRNA Cys
SCN18_30_10_14_R2_B_scaffold_2400_4
unknown

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3477..3734
DNA (258bp) protein (86aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2400_5
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4329..4973
DNA (645bp) protein (215aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DE4
Uncharacterized protein {ECO:0000313|EMBL:KKL46482.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase family protein
SCN18_30_10_14_R2_B_scaffold_2400_6
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5236..6492)
DNA (1257bp) protein (419aa)
mercuric reductase (EC:1.16.1.1)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000366A568
Mercuric reductase {ECO:0000313|EMBL:EAQ82142.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
SCN18_30_10_14_R2_B_scaffold_2400_7
unknown

Not on your lists

comp(6534..6671)
DNA (138bp) protein (46aa)
merA; mercuric reductase
SCN18_30_10_14_R2_B_scaffold_2400_8
SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7008..8399)
DNA (1392bp) protein (464aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=2 Tax=Singulisphaera acidiphila RepID=L0DF33_SINAD
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:AGA27989.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2400_9
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8620..9537)
DNA (918bp) protein (306aa)
NADPH:quinone reductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A933B
NADPH:quinone reductase {ECO:0000313|EMBL:KGM34852.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2400_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9736..10185)
DNA (450bp) protein (150aa)
h16_A1802; acetyltransferase (EC:2.3.1.-)
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CAJ92907.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAJ92907.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Acetyltransferase (GNAT) family n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KAR4_CUPNH
SCN18_30_10_14_R2_B_scaffold_2400_11
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10413..10958)
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
Carboxymuconolactone decarboxylase n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WM17_BURSC
carboxymuconolactone decarboxylase
SCN18_30_10_14_R2_B_scaffold_2400_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11067..11684)
DNA (618bp) protein (206aa)
Nitroreductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVI2_9BRAD
NAD(P)H nitroreductase {ECO:0000313|EMBL:KIO48004.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2400_13
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11877..12320)
DNA (444bp) protein (148aa)
DoxX n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CG43_9PLAN
DoxX {ECO:0000313|EMBL:EDL56336.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
DoxX family protein
SCN18_30_10_14_R2_B_scaffold_2400_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12504..13079)
DNA (576bp) protein (192aa)
cupin n=1 Tax=Schlesneria paludicola RepID=UPI00029AC755
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AGA24677.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 15 items

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