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SCN18_30_10_14_R2_B_scaffold_2507

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2507_1
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1085)
DNA (1083bp) protein (361aa)
methyl-accepting chemotaxis protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AF9
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EKO39813.1}; Flags: Precursor; Fragment;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
methyl-accepting chemotaxis protein
SCN18_30_10_14_R2_B_scaffold_2507_2
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(1129..1593)
DNA (465bp) protein (155aa)
purine-binding chemotaxis protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4562
cheW; chemotaxis signal transduction protein CheW
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_30_10_14_R2_B_scaffold_2507_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1904..2311
DNA (408bp) protein (136aa)
nucleotidyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FA3
nucleotidyltransferase/DNA polymerase
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:AGA24970.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2507_4
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2964..3107
DNA (144bp) protein (48aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DBF
Uncharacterized protein {ECO:0000313|EMBL:EKU77072.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
transposase
SCN18_30_10_14_R2_B_scaffold_2507_5
unknown

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comp(3370..4551)
DNA (1182bp) protein (394aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2507_6
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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comp(5842..8133)
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034A450A
hypothetical protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:ADG66306.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2507_7
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8639..9193
DNA (555bp) protein (185aa)
Glycerol uptake facilitator protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AB24_CARHZ
glycerol uptake facilitator protein
Glycerol uptake facilitator protein {ECO:0000313|EMBL:ABB16121.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
SCN18_30_10_14_R2_B_scaffold_2507_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9216..10022)
DNA (807bp) protein (269aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51D4
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ADG69478.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2507_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10133..10771
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031C8655
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_30_10_14_R2_B_scaffold_2507_10
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10768..11133
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5369
Uncharacterized protein {ECO:0000313|EMBL:EAQ78108.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2507_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11187..11930
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EA0B1C
SCN18_30_10_14_R2_B_scaffold_2507_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12037..13026
DNA (990bp) protein (330aa)
cysteine synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C501B
cysteine synthase A
Cysteine synthase A {ECO:0000313|EMBL:AGA26893.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2507_13
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13253..14347)
DNA (1095bp) protein (365aa)
Pyrrolo-quinoline quinone n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DF5
pyrrolo-quinoline quinone repeat-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_2507_14
unknown

Not on your lists

comp(14372..14728)
DNA (357bp) protein (119aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2507_15
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14738..15844)
DNA (1107bp) protein (369aa)
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:ADY59640.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ADY59640.1};; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
putative iron alcohol dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DF6
SCN18_30_10_14_R2_B_scaffold_2507_16
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15864..17426)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DF7
Uncharacterized protein {ECO:0000313|EMBL:EDY17518.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NAD-dependent aldehyde dehydrogenase
SCN18_30_10_14_R2_B_scaffold_2507_17
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17470..18423
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG69011.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2507_18
unknown

Not on your lists

18437..18574
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2507_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18940..19773
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4211
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB14950.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2507_20
unknown

Not on your lists

19817..19996
DNA (180bp) protein (60aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2507_21
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20059..21243)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E28
Uncharacterized protein {ECO:0000313|EMBL:EDL56318.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2507_22
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21240..23039)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E27
Uncharacterized protein {ECO:0000313|EMBL:EDL61897.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
pyrrolo-quinoline quinone repeat-containing protein
SCN18_30_10_14_R2_B_scaffold_2507_23
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23104..24186)
DNA (1083bp) protein (361aa)
probable serine/threonine protein kinase related protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E26
Probable serine/threonine protein kinase related protein {ECO:0000313|EMBL:EDL61898.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Pyrrolo-quinoline quinone
SCN18_30_10_14_R2_B_scaffold_2507_24
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24183..25367)
DNA (1185bp) protein (395aa)
probable serine/threonine protein kinase related protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E26
Probable serine/threonine protein kinase related protein {ECO:0000313|EMBL:EDL61898.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
pyrrolo-quinoline quinone repeat-containing protein
SCN18_30_10_14_R2_B_scaffold_2507_25
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25564..26841)
DNA (1278bp) protein (426aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
coenzyme F390 synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BF7
Coenzyme F390 synthetase (FtsA-2) {ECO:0000313|EMBL:EEF58084.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCN18_30_10_14_R2_B_scaffold_2507_26
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27031..28191)
DNA (1161bp) protein (387aa)
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4086
1-pyrroline-5 carboxylate dehydrogenase {ECO:0000313|EMBL:EDL58318.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
delta-1-pyrroline-5-carboxylate dehydrogenase
Displaying 26 items

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