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SCN18_30_10_14_R2_B_scaffold_2523

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2523_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=F5LCS5_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGL19853.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2523_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1299..2237
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
2-dehydropantoate 2-reductase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNW0_VARPS
SCN18_30_10_14_R2_B_scaffold_2523_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2663..3919
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5896
Uncharacterized protein {ECO:0000313|EMBL:KKL12132.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase
SCN18_30_10_14_R2_B_scaffold_2523_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3932..4636)
DNA (705bp) protein (235aa)
SCN18_30_10_14_R2_B_scaffold_2523_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5325..5702)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030A3EEE
SCN18_30_10_14_R2_B_scaffold_2523_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5909..6250)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003045D7A
Marine sediment metagenome DNA, contig: S03H2_S09216 {ECO:0000313|EMBL:GAH68960.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS4 family protein
SCN18_30_10_14_R2_B_scaffold_2523_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6314..6769)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=4815978 bin=GWA2_Elusi_like_61_42 species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=GWA2_Elusimicrobia_61_42_curated
SCN18_30_10_14_R2_B_scaffold_2523_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7321..7779
DNA (459bp) protein (153aa)
hypothetical protein n=2 Tax=Methylobacterium sp. WSM2598 RepID=UPI000377AEB2
Transposase {ECO:0000313|EMBL:CDH45749.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2523_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7830..7967
DNA (138bp) protein (46aa)
SCN18_30_10_14_R2_B_scaffold_2523_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8030..8776)
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9C0_COLFT
ygfF; Short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCN18_30_10_14_R2_B_scaffold_2523_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8806..10497)
DNA (1692bp) protein (564aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Dihydroxy-acid dehydratase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDN6_RHOM4
dihydroxy-acid dehydratase
SCN18_30_10_14_R2_B_scaffold_2523_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10607..11491
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Brenneria sp. EniD312 RepID=G7LUC3_9ENTR
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EHD19696.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. EniD312.;"
ilvY; DNA-binding transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_2523_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11518..11757)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4765
SCN18_30_10_14_R2_B_scaffold_2523_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11788..12372)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41B7
SCN18_30_10_14_R2_B_scaffold_2523_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12369..12539)
DNA (171bp) protein (57aa)
Displaying 15 items

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