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SCN18_30_10_14_R2_B_scaffold_2616

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2616_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3..1076
DNA (1074bp) protein (358aa)
initiation of chromosome replication n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F50
Chromosomal replication initiator protein dnaA {ECO:0000256|RuleBase:RU000577}; TaxID=1036852 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A2.;"
chromosomal replication initiator protein DnaA
SCN18_30_10_14_R2_B_scaffold_2616_2
unknown

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comp(1138..1479)
DNA (342bp) protein (114aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2616_3
unknown

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comp(1695..2648)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41D2
SCN18_30_10_14_R2_B_scaffold_2616_4
unknown

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comp(2603..3817)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41D2
SCN18_30_10_14_R2_B_scaffold_2616_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3814..4944)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKP4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29944.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2616_6
unknown

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comp(4941..6071)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C480D
SCN18_30_10_14_R2_B_scaffold_2616_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6073..7182)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C480E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29944.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2616_8
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7198..8769)
DNA (1572bp) protein (524aa)
alginate O-acetyl transferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EFE
D-alanine export protein
Putative membrane protein involved in D-alanine export {ECO:0000313|EMBL:AGA29945.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2616_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9036..10133
DNA (1098bp) protein (366aa)
phosphoribosylaminoimidazole synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EFF
phosphoribosylaminoimidazole synthetase
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_2616_10
SCNpilot_BF_INOC_Clostridium_37_18, SCNpilot_BF_INOC_Clostridium_37_18, Clostridiales, Clostridia, Firmicutes, Bacteria

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10244..11620
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
PAS sensor protein (EC:2.7.13.3)
two-component sensor histidine kinase PhoR n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C401F
SCN18_30_10_14_R2_B_scaffold_2616_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(11637..13187)
DNA (1551bp) protein (517aa)
probable protein kinase yloP-putative serine/threonine protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FF6
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA28054.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2616_12
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(13312..13836)
DNA (525bp) protein (175aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAV7_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39363.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCN18_30_10_14_R2_B_scaffold_2616_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13954..14556)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5A21
sigma-70 familyRNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV60678.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2616_14
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

15107..16240
DNA (1134bp) protein (378aa)
HEAT domain protein repeat-containing protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C389A
heat domain-containing protein
Tax=GWD2_Elusimicrobia_63_28_curated
SCN18_30_10_14_R2_B_scaffold_2616_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16093..18036)
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26623.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 15 items

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