ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2936

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2936_1
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73..1047
DNA (975bp) protein (325aa)
AP endonuclease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C36BE
xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADY57952.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_2936_2
unknown

Not on your lists

1050..1331
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4210
SCN18_30_10_14_R2_B_scaffold_2936_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1337..1921
DNA (585bp) protein (195aa)
anthranilate synthase subunit II n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4212
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase {ECO:0000313|EMBL:AGA30632.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2936_4

Not on your lists

comp(2191..2637)
DNA (447bp) protein (149aa)
acetyltransferase, GNAT family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7B
Marine sediment metagenome DNA, contig: S01H1_S33788 {ECO:0000313|EMBL:GAG37828.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
N-acetyltransferase GCN5
SCN18_30_10_14_R2_B_scaffold_2936_5
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2666..3250)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7C
Uncharacterized protein {ECO:0000313|EMBL:KFY77490.1}; TaxID=1420912 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus pannorum VKM F-103.;"
SCN18_30_10_14_R2_B_scaffold_2936_6
unknown

Not on your lists

comp(3308..3610)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7D
SCN18_30_10_14_R2_B_scaffold_2936_7
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

comp(3746..5035)
DNA (1290bp) protein (430aa)
Amino-acid N-acetyltransferase {ECO:0000313|EMBL:EEF61831.1}; EC=2.3.1.1 {ECO:0000313|EMBL:EEF61831.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
N-acetylglutamate synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58D8
argB; Acetylglutamate kinase and N-acetylglutamate synthase family enzyme
SCN18_30_10_14_R2_B_scaffold_2936_8
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

5206..6270
DNA (1065bp) protein (355aa)
thioredoxin reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58D7
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:ADB17817.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_2936_9
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6295..7515
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4B1C9
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
SCN18_30_10_14_R2_B_scaffold_2936_10
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7505..8587)
DNA (1083bp) protein (361aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42D8
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EIL93293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Rieske (2Fe-2S) domain-containing protein
SCN18_30_10_14_R2_B_scaffold_2936_11
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

comp(8765..9571)
DNA (807bp) protein (269aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ADY61502.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ADY61502.1};; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
D-mannonate oxidoreductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C522E
SCN18_30_10_14_R2_B_scaffold_2936_12
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9664..11730)
DNA (2067bp) protein (689aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C522F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88670.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_2936_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12087..12404
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5914
TBP associated factor (Mot1), putative {ECO:0000313|EMBL:EKV09777.1}; TaxID=1170229 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium digitatum (strain PHI26 / CECT 20796) (Green mold).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2936_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12549..13451
DNA (903bp) protein (301aa)
Uma1 protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5915
Metallophosphoesterase {ECO:0000313|EMBL:BAL53935.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
phosphoesterase
SCN18_30_10_14_R2_B_scaffold_2936_15
unknown

Not on your lists

13606..14331
DNA (726bp) protein (242aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2936_16
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14389..16251)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42D4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26474.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2936_17
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16326..17393)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00037789C9
Putative conserved integral membrane protein
Putative conserved integral membrane protein {ECO:0000313|EMBL:AIE85272.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCN18_30_10_14_R2_B_scaffold_2936_18
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17538..18293)
DNA (756bp) protein (252aa)
short-chain dehydrogenase/reductase SDR n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A4F
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJT06754.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
SCN18_30_10_14_R2_B_scaffold_2936_19
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18585..20111
DNA (1527bp) protein (509aa)
Peptidase families S8 and S53 domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VVJ7_9CYAN
Peptidase families S8 and S53 domain protein {ECO:0000313|EMBL:EDX73882.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
subtilase family protease
Displaying 19 items

View Taxonomy