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SCN18_30_10_14_R2_B_scaffold_662

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_662_1
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

comp(62..1054)
DNA (993bp) protein (331aa)
Putative xylanase/chitin deacetylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DP38_SINAD
xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:AGA31022.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_2
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1058..4066)
DNA (3009bp) protein (1003aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF04_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL56734.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
membrane-bound dehydrogenase
SCN18_30_10_14_R2_B_scaffold_662_3
unknown

Not on your lists

4218..4364
DNA (147bp) protein (49aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_662_4
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(4747..5220)
DNA (474bp) protein (158aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
RpiR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4292
Ribose 5-phosphate epimerase (Pentose phosphate) {ECO:0000313|EMBL:EAQ82446.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
SCN18_30_10_14_R2_B_scaffold_662_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5217..6284)
DNA (1068bp) protein (356aa)
probable low molecular weight protein-tyrosine-phosphatase ywlE n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4291
protein-tyrosine phosphatase
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_662_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6527..7897
DNA (1371bp) protein (457aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A68
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15309.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_662_7
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8045..8542
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA764
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_30_10_14_R2_B_scaffold_662_8
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8547..8999
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2B7F7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB18144.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_662_9
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(9004..9405)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030A7D2D
Uncharacterized protein {ECO:0000313|EMBL:EKU99443.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_30_10_14_R2_B_scaffold_662_10
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9471..10274)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030FEF1A
Putative amidohydrolase {ECO:0000313|EMBL:EOR95438.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCN18_30_10_14_R2_B_scaffold_662_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10392..11717)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3850
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27939.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_12
unknown

Not on your lists

comp(12002..12841)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L5W2_9CYAN
SCN18_30_10_14_R2_B_scaffold_662_13
SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12948..13475)
DNA (528bp) protein (176aa)
TspO and MBR like protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SH98_PLABD
TspO and MBR-like protein
TspO and MBR like protein {ECO:0000313|EMBL:ADY60639.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_662_14
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13642..14445)
DNA (804bp) protein (268aa)
predicted Zn-dependent hydrolases n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57B4
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68842.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
Zn-dependent hydrolases of the beta-lactamase fold
SCN18_30_10_14_R2_B_scaffold_662_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14652..15866)
DNA (1215bp) protein (405aa)
Cofactor-independent phosphoglycerate mutase {ECO:0000313|EMBL:EAQ76962.1}; EC=5.4.2.- {ECO:0000313|EMBL:EAQ76962.1};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
phosphoglycerate mutase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FA1
homoserine kinase
SCN18_30_10_14_R2_B_scaffold_662_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16027..18006
DNA (1980bp) protein (660aa)
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4345
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28770.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_17
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18008..18784)
DNA (777bp) protein (259aa)
Methyltransferase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHF0_SINAD
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AGA28794.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_18
unknown

Not on your lists

18965..19807
DNA (843bp) protein (281aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_662_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19864..20871)
DNA (1008bp) protein (336aa)
DNA polymerase III subunit delta n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C40C9
DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AGA27261.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_20
unknown

Not on your lists

comp(20908..21249)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35C5
SCN18_30_10_14_R2_B_scaffold_662_21
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(21320..21796)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000377A311
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48413.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcription activator effector binding protein
SCN18_30_10_14_R2_B_scaffold_662_22
unknown

Not on your lists

comp(21816..22349)
DNA (534bp) protein (178aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_662_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22365..23720)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYI0_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18139.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_662_24
unknown

Not on your lists

comp(23804..24259)
DNA (456bp) protein (152aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_662_25
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24377..25075)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DAF
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:KFE72467.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
SCN18_30_10_14_R2_B_scaffold_662_26
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25135..25974)
DNA (840bp) protein (280aa)
RNA polymerase sigma factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5559
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
sigma-70 family RNA polymerase sigma factor
SCN18_30_10_14_R2_B_scaffold_662_27
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(26482..28290)
DNA (1809bp) protein (603aa)
30S ribosomal protein S1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C555A
30S ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:AGA26556.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_28
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

28620..30200
DNA (1581bp) protein (527aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C555B
lipoprotein release ABC transporter permease
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AGA27658.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_662_29
unknown

Not on your lists

30268..30726
DNA (459bp) protein (153aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_662_30
unknown

Not on your lists

30884..31411
DNA (528bp) protein (176aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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