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SCN18_30_10_14_R2_B_scaffold_1180

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1180_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..74)
DNA (72bp) protein (24aa)
SCN18_30_10_14_R2_B_scaffold_1180_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(866..1558)
DNA (693bp) protein (231aa)
SCN18_30_10_14_R2_B_scaffold_1180_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1836..2087
DNA (252bp) protein (84aa)
Restriction-modification system regulatory protein, putative n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSA1_9PLAN
Restriction-modification system regulatory protein, putative {ECO:0000313|EMBL:EAQ80559.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1180_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2235..2684)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C48AC
putative bacteriophage-like protein
Putative bacteriophage related protein {ECO:0000313|EMBL:ADV63028.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1180_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2711..3040)
DNA (330bp) protein (110aa)
SCN18_30_10_14_R2_B_scaffold_1180_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3326..3886
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000305A5D9
Uncharacterized protein {ECO:0000313|EMBL:EDL57835.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
RNA polymerase sigma factor
SCN18_30_10_14_R2_B_scaffold_1180_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3946..7125
DNA (3180bp) protein (1060aa)
serine/threonine protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42C4
Protein containing Serine/threonine protein kinase {ECO:0000313|EMBL:EMI16100.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
serine/threonine protein kinase
SCN18_30_10_14_R2_B_scaffold_1180_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7162..12117)
DNA (4956bp) protein (1652aa)
Cadherin n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BF8
Secreted protein containing Cellulosome anchoring protein {ECO:0000313|EMBL:EKK03322.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1180_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12674..14425)
DNA (1752bp) protein (584aa)
pyruvate dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029ACEF7
Uncharacterized protein {ECO:0000313|EMBL:AKF85646.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
thiamine pyrophosphate TPP-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1180_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14590..15747
DNA (1158bp) protein (386aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRA3_SINAD
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA31507.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1180_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15814..19527
DNA (3714bp) protein (1238aa)
transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C574C
cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGA28089.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1180_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19335..19730)
DNA (396bp) protein (132aa)
SCN18_30_10_14_R2_B_scaffold_1180_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20363..20584)
DNA (222bp) protein (74aa)
SCN18_30_10_14_R2_B_scaffold_1180_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20711..22843
DNA (2133bp) protein (711aa)
probable serine/threonine-protein kinase pknB n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3653
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49050.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine/threonine protein kinase
SCN18_30_10_14_R2_B_scaffold_1180_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22930..24282)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D7E
MerR family transcriptional regulator {ECO:0000313|EMBL:KDN81686.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
Displaying 15 items

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