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SCN18_30_10_14_R2_B_scaffold_1863

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1863_1
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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298..1350
DNA (1053bp) protein (351aa)
ABC transporter ATPase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5784
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGA25853.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1863_2
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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1460..2509
DNA (1050bp) protein (350aa)
ABC multidrug efflux pump, inner membrane subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5538
ABC multidrug efflux pump, inner membrane subunit
Tax=RBG_13_Acidobacteria_68_16_curated
SCN18_30_10_14_R2_B_scaffold_1863_3
unknown

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comp(2605..2937)
DNA (333bp) protein (111aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1863_4
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2953..3786)
DNA (834bp) protein (278aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49ED
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SCN18_30_10_14_R2_B_scaffold_1863_5
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3943..4773
DNA (831bp) protein (277aa)
iduronate-2-sulfatase (EC:3.1.6.13)
Protein containing DUF303 n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S4D6_9PLAN
Protein containing DUF303 {ECO:0000313|EMBL:EMI21054.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
SCN18_30_10_14_R2_B_scaffold_1863_6
unknown

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comp(4778..4963)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5061
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1863_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5156..5974)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5061
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25376.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1863_8
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6067..6240)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5060
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG68017.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_1863_9
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6418..7656)
DNA (1239bp) protein (413aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B62
peptidase S1 and S6 chymotrypsin/Hap
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCN18_30_10_14_R2_B_scaffold_1863_10
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7786..8601
DNA (816bp) protein (272aa)
truncated hemoglobin n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DFF
Globin {ECO:0000313|EMBL:EEF58363.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
globin
SCN18_30_10_14_R2_B_scaffold_1863_11
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8605..9513
DNA (909bp) protein (303aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase id=4964310 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SCN18_30_10_14_R2_B_scaffold_1863_12
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(9536..12805)
DNA (3270bp) protein (1090aa)
Uncharacterized protein, plant photosystem II stability/assembly factor like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG23_CHLTF
hypothetical protein
Uncharacterized protein, plant photosystem II stability/assembly factor like protein {ECO:0000313|EMBL:AEP12136.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCN18_30_10_14_R2_B_scaffold_1863_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12906..14387
DNA (1482bp) protein (494aa)
serine protease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4422
trypsin-like serine protease with C-terminal PDZ domain
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_1863_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14478..15422
DNA (945bp) protein (315aa)
beta-lactamase-like protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5364
beta-lactamase superfamily metal-dependent hydrolase
Metal-dependent hydrolase, beta-lactamase superfamily I {ECO:0000313|EMBL:AGA26996.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1863_15
unknown

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comp(16519..16806)
DNA (288bp) protein (96aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1863_16
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17046..18380
DNA (1335bp) protein (445aa)
Na+/H+ antiporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AC8
nhaP; Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:CAN91654.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_1863_17
unknown

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comp(18537..18809)
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1863_18
unknown

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comp(18827..19072)
DNA (246bp) protein (82aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1863_19
unknown

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comp(19084..19287)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41B6
SCN18_30_10_14_R2_B_scaffold_1863_20
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19685..21571
DNA (1887bp) protein (629aa)
Patatin domain protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TAH9_9PLAN
Patatin domain protein {ECO:0000313|EMBL:EMI46114.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
putative patatin-like phospholipase
Displaying 20 items

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